Transcript Information: R_Transcript_304856.p1


Annotated TAIR IDAT1G09820.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3190594-3192414 | Reverse length=606
E-Value6E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4107684279817
Replicate 23.03720068915
Replicate 32.0169454487178
Condition 2: 8 Hour
Replicate 13.8499787652901
Replicate 23.0939584937489
Replicate 31.8265771693471
Condition 3: 24 Hour
Replicate 13.0321632187534
Replicate 21.8032601608648
Replicate 32.7531704008676


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_304856.p1 GENE.R_Transcript_304856~~R_Transcript_304856.p1 ORF type:complete len:159 (-),score=34.74,PPR_2|PF13041.2|0.00096,PPR_2|PF13041.2|2.7e-14,PPR_2|PF13041.2|4.2e-17,PPR_2|PF13041.2|4.1e-16,PPR_2|PF13041.2|4.1e+02,PPR_1|PF12854.3|6.1e-08,PPR_1|PF12854.3|1.1e-12,PPR_1|PF12854.3|5.2e-12,PPR_1|PF12854.3|4.3,PPR|PF01535.16|2.6e+02,PPR|PF01535.16|0.00019,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|1.2e-10,PPR|PF01535.16|1.3e+03,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|7.7e-06,PPR_3|PF13812.2|2.2e+03 R_Transcript_304856:171-599(-)
ATGGGGCATAAACCTGACACAGTGACATATAACATAAGGGCAGGTGCTCTCTGCCAGAAAGGGGAGACAAGAAATGCAGTTAGGCTATTAAATGAAATGTTTGAGGTGGGTTTGACTCCGAATCATGTGACCTACAATACCTTGATTGATGGCTACTGTAGGGAAGGAAATCTTGGGGCTGCTATGACTATGAGAATGAGAATGGAAAGAGAGGGTAGAAGAGCAAATTTGGTGACTTACAATTTGTTAATAAAGGGTCTTTGTAGTAAAGGGAAGTTGGAAGAAGCAAACAAACTTCTCAACGAGATGTTAGAGAAAGGTCTTGTCCCGAATAGGATCACCTATGATATAATAAAGGAAGAAATGATGGAGAAGGGATTTGTTCCAGATATTGATGGACATCTTTACAGCCAGTCTCCAATGTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_304856.p1 GENE.R_Transcript_304856~~R_Transcript_304856.p1 ORF type:complete len:159 (-),score=34.74,PPR_2|PF13041.2|0.00096,PPR_2|PF13041.2|2.7e-14,PPR_2|PF13041.2|4.2e-17,PPR_2|PF13041.2|4.1e-16,PPR_2|PF13041.2|4.1e+02,PPR_1|PF12854.3|6.1e-08,PPR_1|PF12854.3|1.1e-12,PPR_1|PF12854.3|5.2e-12,PPR_1|PF12854.3|4.3,PPR|PF01535.16|2.6e+02,PPR|PF01535.16|0.00019,PPR|PF01535.16|1.5e-08,PPR|PF01535.16|1.2e-10,PPR|PF01535.16|1.3e+03,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|0.013,PPR_3|PF13812.2|7.7e-06,PPR_3|PF13812.2|2.2e+03 R_Transcript_304856:171-599(-)
MGHKPDTVTYNIRAGALCQKGETRNAVRLLNEMFEVGLTPNHVTYNTLIDGYCREGNLGAAMTMRMRMEREGRRANLVTYNLLIKGLCSKGKLEEANKLLNEMLEKGLVPNRITYDIIKEEMMEKGFVPDIDGHLYSQSPMS*

Click here to download the sequence:
Link to NCBI Protein BLAST