Transcript Information: R_Transcript_304960.p1


Annotated TAIR IDAT5G08240.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23160.1); Has 69 Blast hits to 69 proteins in 10 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2651382-2652336 | Reverse length=258
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.98134198681284
Replicate 20.37627778523832
Replicate 31.7241630448717
Condition 2: 8 Hour
Replicate 10.17552591360032
Replicate 20.40073264948361
Replicate 30.91083350783304
Condition 3: 24 Hour
Replicate 10.3291441896445
Replicate 20.15810221426937
Replicate 30.078450554433324


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_304960.p1 GENE.R_Transcript_304960~~R_Transcript_304960.p1 ORF type:5prime_partial len:279 (+),score=24.33 R_Transcript_304960:3-839(+)
ATAGTTAGTCTTCTATTTCTCATGGCTTCTAGCCATAAGAATAAGACTTCCCAAAGACCACCAAAAACCAACTGGTTTCTTAGCTGTTTTGGGGTTCACCGGAAACCGCCAGCCGCCGACAAGAAGGCTCCAAACTCCGGTTGCTGGAGAAGGAGGTGGTTTAGAATATGCTTGCCCAAGATAAAGATCATCAGCTTCAAGAAGGGATCAAAAGTCAGCTTCCATAAAAAAGCAGCTGCCATCAAAGGAGCCACCAAAGGTTTAATGTTGCTTGAAGCCTCCAAGGTTCATAAATTTAAGCTTCATGATCATATTATCACCCAAAACGAAGAGCCAAAAGGGATTATCTCTAAAGAAGTCATACTTGATCACCTTGAAATTGACCTGAGTCGGGTAGATCAATCAGACGATAACACATGTCATAAACAAGGGTTCAAGTCCAAGTCCGAGAATAAAGGCATGCATGGGTTCTCCCCTTATAACAAGGCGAAAAAATGCTTATTGGCGTCTAAGGTGACTAAGGACTCATTGATTGGGGCTTCAATCATGGTATTAACGCTAATAATAATGTCAATTTGGGGAAGATTATGTGCCATTTTATGCATGTCCGCTTGGCTCTATTGCGTACCACTTTTAAGGGAAGCCAGAAAAATGAACTTTGAATCACATGAGAATTCCAAGCAATTGAAAATGAGCTCAGAATTGTACAATAAGAAGGTGGTGTTAGAAGGTCTTCTTCAAAGGAATCACAGGATTAATGCGAAAACTGGTTTCAAGCCAAGACACATGAACATTGAAGATATGCTTGCTTGTTTAGAGGCATGGAATCCTCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_304960.p1 GENE.R_Transcript_304960~~R_Transcript_304960.p1 ORF type:5prime_partial len:279 (+),score=24.33 R_Transcript_304960:3-839(+)
IVSLLFLMASSHKNKTSQRPPKTNWFLSCFGVHRKPPAADKKAPNSGCWRRRWFRICLPKIKIISFKKGSKVSFHKKAAAIKGATKGLMLLEASKVHKFKLHDHIITQNEEPKGIISKEVILDHLEIDLSRVDQSDDNTCHKQGFKSKSENKGMHGFSPYNKAKKCLLASKVTKDSLIGASIMVLTLIIMSIWGRLCAILCMSAWLYCVPLLREARKMNFESHENSKQLKMSSELYNKKVVLEGLLQRNHRINAKTGFKPRHMNIEDMLACLEAWNPL*

Click here to download the sequence:
Link to NCBI Protein BLAST