Transcript Information: R_Transcript_305078.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31201642657639
Replicate 20.17945555911366
Replicate 30.68524428706439
Condition 2: 8 Hour
Replicate 10.5232022424625
Replicate 20.47779662053815
Replicate 30.38785492778605
Condition 3: 24 Hour
Replicate 11.0792131602767
Replicate 20.18850648624425
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_305078.p1 GENE.R_Transcript_305078~~R_Transcript_305078.p1 ORF type:internal len:234 (+),score=21.75,RVT_1|PF00078.23|2.7e-28,RVT_1|PF00078.23|1.3e+03 R_Transcript_305078:3-701(+)
TGGTTTGCTTTGAAACTTGACCTTGAGAAGGCCTATGACAGAATGGAATGGGACTTTATTAGAAATATGCTTTTTACCTTCAATTTTGAATCCCACTCTATTAGGTTGATCATGGAATGCATTACTTCTATATCTACCTCTATCTTGGTTAATGGGGGCGCCACTGAGGAATTCCAACCCTCTCAGGGGCTCAGACAAGGGGACCCCTTGTCCCCCTATATCTTTATCCTGTGCATGGAGTTTCTCTCCAAACTCATCCACAATGCTTGTGAGGACAAATCCTGGACCCCTTTTTCCTTTTCCAAATCTGGCCTAGTGATCTCCCATCTCCTCTTTGCGGATGATGTCATTCTCTTTGGAGAAGCGAACCTTAGTACTTTGGAAGCCATGGAATCCACCTTGAGTCTGTTCTGCCAAGCCTCTGGTCAGGAAATCAATGCTAATAAAAGCAATCTTTTCTTTTCACCCAATACCCCACCCGAGATCATAAAAGCCTTTGAGGATTCTCTGGGGACCAAACCAACTGCAGATCTAGGTACCTACCTGGGCCTCCCTCTCACTATCAAGAGGCCTAGTAAGAACCAATTGAGGGGGATTGTTAACAAGGTTAGAGATAGACTAGCCTCCTGGAAGACCAATTTTATCACTAGAGCGGGGAGGGCTTGCCTTATCAATGCCACCCTTAGTGCCATCCCTAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_305078.p1 GENE.R_Transcript_305078~~R_Transcript_305078.p1 ORF type:internal len:234 (+),score=21.75,RVT_1|PF00078.23|2.7e-28,RVT_1|PF00078.23|1.3e+03 R_Transcript_305078:3-701(+)
WFALKLDLEKAYDRMEWDFIRNMLFTFNFESHSIRLIMECITSISTSILVNGGATEEFQPSQGLRQGDPLSPYIFILCMEFLSKLIHNACEDKSWTPFSFSKSGLVISHLLFADDVILFGEANLSTLEAMESTLSLFCQASGQEINANKSNLFFSPNTPPEIIKAFEDSLGTKPTADLGTYLGLPLTIKRPSKNQLRGIVNKVRDRLASWKTNFITRAGRACLINATLSAIPN

Click here to download the sequence:
Link to NCBI Protein BLAST