Transcript Information: R_Transcript_305201.p1


Annotated TAIR IDAT5G15280.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4962293-4965976 | Forward length=1227
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33801779545776
Replicate 20
Replicate 30.56559845916426
Condition 2: 8 Hour
Replicate 10
Replicate 20.13803013482213
Replicate 30.11204697913819
Condition 3: 24 Hour
Replicate 10.14171485943027
Replicate 20.13614357339863
Replicate 30.27021857638145


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_305201.p1 GENE.R_Transcript_305201~~R_Transcript_305201.p1 ORF type:3prime_partial len:162 (+),score=26.21 R_Transcript_305201:130-612(+)
ATGCTCTGCTGGGTCTCATCGACTCATCGCTTCTCCATTGTTGTCAAGGTCTGTTCTTCTTTCTCTTCTTTCTTTGCCCTGAAATTTCCTCTACATACTTCTTCTGCTTCTCCTACTGATTGTGCAAAACCCTCAACTCATTCACATAAATTAAGCAATACCCAGTTGAAATCTCCTCCAATTAATACTACTGTTGTGGGAAAATCAGTTCTTTCCAAGTGTTCTAATCTTCTTAACCATAAAGTTGATGACTTTATTATTGGTTCTAATGCTTCTGTAAATGGGTTACTACTCAGCATTTCTCATGTATCCCCTGAAACGTGTCGCAAATTTTTGAGGTTTTCAAGTTTGAACCCCGAACATGTCCTTGAAATTTTGTTGGATTTTCAGTTGGGTGGTGGGAATTTGCTCTTTGATGCTAAAATTGTTAGATCTTTGTGGGAAATATTTAAAAGGGCAGGTGATAAGCATGTGGGTTTTAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_305201.p1 GENE.R_Transcript_305201~~R_Transcript_305201.p1 ORF type:3prime_partial len:162 (+),score=26.21 R_Transcript_305201:130-612(+)
MLCWVSSTHRFSIVVKVCSSFSSFFALKFPLHTSSASPTDCAKPSTHSHKLSNTQLKSPPINTTVVGKSVLSKCSNLLNHKVDDFIIGSNASVNGLLLSISHVSPETCRKFLRFSSLNPEHVLEILLDFQLGGGNLLFDAKIVRSLWEIFKRAGDKHVGFK

Click here to download the sequence:
Link to NCBI Protein BLAST