Transcript Information: R_Transcript_30546.p1


Annotated TAIR IDAT1G21450.1
Annotated Gene NameSCARECROW-like 1
Annotated Gene Symbol(s)SCL1
Annotation TypeOrtholog
Chromosome Positionchr1:7509721-7511502 | Forward length=593
E-Value1.1E-220
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 145.097517084094
Replicate 231.302176811111
Replicate 338.177895993587
Condition 2: 8 Hour
Replicate 135.204036599977
Replicate 252.13443696672
Replicate 356.51600376311
Condition 3: 24 Hour
Replicate 139.061910099885
Replicate 228.074001701376
Replicate 338.84466271356


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30546.p1 GENE.R_Transcript_30546~~R_Transcript_30546.p1 ORF type:complete len:546 (+),score=93.64,GRAS|PF03514.10|9.8e-126 R_Transcript_30546:742-2379(+)
ATGTCTTTAGTTAGTTCAGCCGATATGTCTACAACATCGTATGCAAATTCCAAGCTCTTTTCGCTGCAAGGAGGTAATAACAGCTCTGGGTTGTCCACTCAACTGTATGGCTCTGACAAGCACAAGATCATGTACATGACGGAATCTTTCAATGGTCCAAGTTATGATCCAAAGTTCTTCATGGACTCACCCTCCGAAGAGCTCATCCATCCATTGGGACATGATGAGAGTTCTTACCCAACAAATTACGAGCTGGATTACTTTGTAAATCAGAGTTCTGATGCAATTGAATATGACGAGGTTAAGATGAGGCTGAAGCTTCAAGAATTGGAGCATGCCCTCCTTGATGAAGACGAGGTTGTGATCGGGCCTAGGCACAGCATGGAACTCGATGAAGATTGGGCCAACCCGTCAAGGATGCTCCATGACTCACCCAAAGAGTCGAGTTCCTCGGAATCTTCTAACTTCAGTAGCATCAGTAGCAGCAAAGAGTTATCAGTCCCTTCTCCTCCTCGTACTCCCAAACAGCTGCTCTTCAATTGTGCAACTATAATTGCAGAGGGAAATCTTGACGAAGCTGCTACTATGATCGGTGAGCTTAGACAAATGGTTTCAATACAAGGGGACCCATCCCAGAGGATAGCGGCCTACATGGTAGAAGGCCTTGCTGCCCGCTTGGCTGCATCGGGTAAAGTTCTATACAAAGCCTTGAAATGCAAAGAGCCACCTTCACTTGACAGGCTTGCAGCAATGCAAATCCTTTTCGAGGTATGCCCATGTTTTAAATTTGGGTATATGGCAGCGAATGCAAAGATCATAGAGGCAATTAAGAATGAGAAGAAGGTACACATTATAGATTTCGACATAAACCAAGGAAATCAATACATAATGCTTATACAATCCCTTTCCAAACAAATTAATAAGCCTGTACAGTTGAGGGTGACAGGGGTTGATGATCCTGAATCAATTCAGCGCCCTGTTGGTGGCCTAAAAAACATCGGGCAAAGGCTGGAAGCGTTAGCCGAATTAGTTGGAGTGCCATTTGAGTTCAAAGCAGTACCAGCAAGAACTCCACTTGTCACCCCGGCAATGTTAGAATGCCGAGCTGGAGAAGCCCTGGTGGTTAACTTTGCCTTCCAGCTTCATCACATGCCTGATGAGAGTGTCTCGACCATCAACCAACGTGACCAACTTCTTCGAATGGTTAAAAGTCTAAACCCTAAGTTAGTGACCATTGTTGAGCAGGATGTAAACACAAACACCACCCCTTTCCTCTCTAGGTTTTCAGAGGTTTACAGTTATTACTCTGCTATTTATGAGTCTCTCGATGCTACCCTCCCCAGAGAGAGCCAGGACCGAGTGAACGTTGAGAAGCAGTGTTTGGCGCGTGACATTGTGAACATTGTTGCTTGTGAAGGGGAGGACAGGATTGAGCGATACGAGGTTGCTGGAAAATGGAGGGCAAGAATGCTGATGGCTGGTTTCAGCTCTCGACCAATGAGTAAGAACATCAGGGATATGATTCAGCAAGTCATTGTATCACAGTATTGTAACAGGTTCACATTGAAGGAGGAAATAGATGAGCTTCATTTTGGATGGGAAGACAAAAACTTGGTCGTCACATCAGCCTGGACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30546.p1 GENE.R_Transcript_30546~~R_Transcript_30546.p1 ORF type:complete len:546 (+),score=93.64,GRAS|PF03514.10|9.8e-126 R_Transcript_30546:742-2379(+)
MSLVSSADMSTTSYANSKLFSLQGGNNSSGLSTQLYGSDKHKIMYMTESFNGPSYDPKFFMDSPSEELIHPLGHDESSYPTNYELDYFVNQSSDAIEYDEVKMRLKLQELEHALLDEDEVVIGPRHSMELDEDWANPSRMLHDSPKESSSSESSNFSSISSSKELSVPSPPRTPKQLLFNCATIIAEGNLDEAATMIGELRQMVSIQGDPSQRIAAYMVEGLAARLAASGKVLYKALKCKEPPSLDRLAAMQILFEVCPCFKFGYMAANAKIIEAIKNEKKVHIIDFDINQGNQYIMLIQSLSKQINKPVQLRVTGVDDPESIQRPVGGLKNIGQRLEALAELVGVPFEFKAVPARTPLVTPAMLECRAGEALVVNFAFQLHHMPDESVSTINQRDQLLRMVKSLNPKLVTIVEQDVNTNTTPFLSRFSEVYSYYSAIYESLDATLPRESQDRVNVEKQCLARDIVNIVACEGEDRIERYEVAGKWRARMLMAGFSSRPMSKNIRDMIQQVIVSQYCNRFTLKEEIDELHFGWEDKNLVVTSAWT*

Click here to download the sequence:
Link to NCBI Protein BLAST