Transcript Information: R_Transcript_305833.p1


Annotated TAIR IDAT5G54620.1
Annotated Gene NameAnkyrin repeat family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22187761-22189746 | Reverse length=431
E-Value4E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6081903924862
Replicate 20.3699788619612
Replicate 31.3118395980175
Condition 2: 8 Hour
Replicate 10.43146898585454
Replicate 20.98506087406104
Replicate 31.0395195509473
Condition 3: 24 Hour
Replicate 10.50567857329745
Replicate 20.29147919238648
Replicate 30.38568642620083


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_305833.p1 GENE.R_Transcript_305833~~R_Transcript_305833.p1 ORF type:complete len:227 (-),score=25.09,Ank_2|PF12796.3|7.7e-11,Ank_2|PF12796.3|1.4e-07,Ank_2|PF12796.3|3e-06,Ank_4|PF13637.2|0.0017,Ank_4|PF13637.2|2.1e-05,Ank_4|PF13637.2|1.1e-05,Ank_5|PF13857.2|2.2e+03,Ank_5|PF13857.2|0.028,Ank_5|PF13857.2|1e-06,Ank_5|PF13857.2|3.2,Ank_5|PF13857.2|0.56,Ank_3|PF13606.2|6.1e+03,Ank_3|PF13606.2|0.49,Ank_3|PF13606.2|0.18,Ank_3|PF13606.2|59,Ank_3|PF13606.2|7.6,Ank_3|PF13606.2|0.47,Ank|PF00023.26|14,Ank|PF00023.26|0.01,Ank|PF00023.26|0.29,Ank|PF00023.26|4e+03,Ank|PF00023.26|0.42 R_Transcript_305833:6-686(-)
ATGGAGATGGGGAAGAGGCTGTATGAAGCTGCACTTGAAGGGAATGTTTCAAATTTAAAATCACTAATCCAAGAAGACCCATTAACTCTTGATAGAATCTCACTAACTTTCCTGCATGAAACCCCTCTTCACATATCAATATTACGTGGTCACTTTGACTTTGCAAAGGCCATACTGAGTCACAAACCTCAACTCGCCACCGAGTTAGACTCCTTAGGCCACTCGCCCCTCCACCTGGCTTCGGCTAAAGGCTACGTGGACATCGTTCGTGAGCTGCTGCGTGTGGGCCCCAGTACCTGCCTTGCTCGTGATAAAGATGGTAAGATCCCCCTTCACTTGGCTATAATCAAGGGGAGCCGAGTTGAGGTGATAACAGAGTTGACTCGGGCATGTCCTGAGTCAACTCGGTTGAGATTGGATAGGGGGGACACTATTTATCACTTATGTGTAAAGTCTAACAACTTGGAGGCTTTTCAAGTGTTGGTGGATGAAAATGATAATAGTAGAAATGATATGTTGAGTGCAAAAAATGATGATGGAAACACTGTCTTGCATTTGGCTGCTCTACACAAGCAGTTGGAGGTACCTTTTTGGCCCTTTTTCTCTTGTGCCAATTTGAACCAATCTTATCCAGTTATATATCAAACTACTCCATTTACAAAATTTATTTACATAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_305833.p1 GENE.R_Transcript_305833~~R_Transcript_305833.p1 ORF type:complete len:227 (-),score=25.09,Ank_2|PF12796.3|7.7e-11,Ank_2|PF12796.3|1.4e-07,Ank_2|PF12796.3|3e-06,Ank_4|PF13637.2|0.0017,Ank_4|PF13637.2|2.1e-05,Ank_4|PF13637.2|1.1e-05,Ank_5|PF13857.2|2.2e+03,Ank_5|PF13857.2|0.028,Ank_5|PF13857.2|1e-06,Ank_5|PF13857.2|3.2,Ank_5|PF13857.2|0.56,Ank_3|PF13606.2|6.1e+03,Ank_3|PF13606.2|0.49,Ank_3|PF13606.2|0.18,Ank_3|PF13606.2|59,Ank_3|PF13606.2|7.6,Ank_3|PF13606.2|0.47,Ank|PF00023.26|14,Ank|PF00023.26|0.01,Ank|PF00023.26|0.29,Ank|PF00023.26|4e+03,Ank|PF00023.26|0.42 R_Transcript_305833:6-686(-)
MEMGKRLYEAALEGNVSNLKSLIQEDPLTLDRISLTFLHETPLHISILRGHFDFAKAILSHKPQLATELDSLGHSPLHLASAKGYVDIVRELLRVGPSTCLARDKDGKIPLHLAIIKGSRVEVITELTRACPESTRLRLDRGDTIYHLCVKSNNLEAFQVLVDENDNSRNDMLSAKNDDGNTVLHLAALHKQLEVPFWPFFSCANLNQSYPVIYQTTPFTKFIYIV*

Click here to download the sequence:
Link to NCBI Protein BLAST