Transcript Information: R_Transcript_30641.p1


Annotated TAIR IDAT1G74410.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27965723-27967681 | Forward length=223
E-Value3.2E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.475519063997
Replicate 212.188863537551
Replicate 313.641090928046
Condition 2: 8 Hour
Replicate 113.480981824888
Replicate 216.498478362223
Replicate 319.035396905275
Condition 3: 24 Hour
Replicate 114.273393257674
Replicate 211.234139359994
Replicate 315.821449455323


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30641.p1 GENE.R_Transcript_30641~~R_Transcript_30641.p1 ORF type:complete len:267 (+),score=70.13,zf-RING_2|PF13639.2|2.1e+03,zf-RING_2|PF13639.2|1.8e+03,zf-RING_2|PF13639.2|8.7e-12,zf-RING_11|PF17123.1|2.2e+03,zf-RING_11|PF17123.1|4.6e-09,zf-RING_11|PF17123.1|1.1e+04,zf-rbx1|PF12678.3|2.6e+03,zf-rbx1|PF12678.3|4e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|5.7e-06 R_Transcript_30641:344-1144(+)
ATGGATGTGGTGCATCATCATCAGTGCACTTGTAGTAGTAGCTCACTCCTGAATGCTTCTCAGCCTTGTGGGCTTTGTGGGAATTCTGGGTTGGGCTCAGAAGCCCAATCAAGATCAACAACCCCTGATATGGTGGAGGATTCTATTTCTGTTGATGGGTCTTTTCAGGACAGAGAGATTAGGGTTTATGATTATATTCCCAAGTTGATTGGTGGTGCTCTTTCTGGTGCTCTCACTGGCATTTTTGCTCTTGCTGGTGCTTTCACTGGAGCCGTAACTGGTGCTCTAGCGGGCAGGGCTTCTGATAGTGGCCTCCTAAGAGGTGCTGGGCTAGGTGCTGTTGCTGGTGCAGTTCTGTCTGTGGAGGTCTTAGAAGCTTCTCGGGCTTATTGGTGCTCACAACAATCTGGTTTACGGAGTCCATCATCAATGGCAGATTTCATAGAGGAGCTTCTCCATGGGAGGTTTGTTGAGGAACAATTACCAACTACTGTACTAACTGGGTACTACTGGCAGCAGGCAAGCATTGCAAATGTCATTTATGACGATATTTATGACCCCTATGGTGATGCTGCACCGAGAGGGTTATCTGGGGATTCACTCAAGAGGCTACCATGTCATGTGATCTTGGATGTGAACAAAACAACCAGCAACATATGTTGCACAATTTGTTTGCAGGATTTTGAGGTAGGAGAAACTGCAAGGAGCTTGCCGCACTGCCAGCACACATTTCACCTAAACTGTGTGGATAGGTGGCTTGTAAGACATGGTTCGTGCCCTGTTTGCAGGCGGGAAGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30641.p1 GENE.R_Transcript_30641~~R_Transcript_30641.p1 ORF type:complete len:267 (+),score=70.13,zf-RING_2|PF13639.2|2.1e+03,zf-RING_2|PF13639.2|1.8e+03,zf-RING_2|PF13639.2|8.7e-12,zf-RING_11|PF17123.1|2.2e+03,zf-RING_11|PF17123.1|4.6e-09,zf-RING_11|PF17123.1|1.1e+04,zf-rbx1|PF12678.3|2.6e+03,zf-rbx1|PF12678.3|4e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|5.7e-06 R_Transcript_30641:344-1144(+)
MDVVHHHQCTCSSSSLLNASQPCGLCGNSGLGSEAQSRSTTPDMVEDSISVDGSFQDREIRVYDYIPKLIGGALSGALTGIFALAGAFTGAVTGALAGRASDSGLLRGAGLGAVAGAVLSVEVLEASRAYWCSQQSGLRSPSSMADFIEELLHGRFVEEQLPTTVLTGYYWQQASIANVIYDDIYDPYGDAAPRGLSGDSLKRLPCHVILDVNKTTSNICCTICLQDFEVGETARSLPHCQHTFHLNCVDRWLVRHGSCPVCRREV*

Click here to download the sequence:
Link to NCBI Protein BLAST