Transcript Information: R_Transcript_306458.p1


Annotated TAIR IDAT5G16715.1
Annotated Gene NameATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases
Annotated Gene Symbol(s)EMB2247
Annotation TypeOrtholog
Chromosome Positionchr5:5485353-5493229 | Forward length=974
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4247823646998
Replicate 21.1688662087424
Replicate 33.2825118823353
Condition 2: 8 Hour
Replicate 12.4485864947245
Replicate 21.4292522413954
Replicate 32.9753671016923
Condition 3: 24 Hour
Replicate 13.8815261704572
Replicate 22.6147987344499
Replicate 33.7006016171661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_306458.p1 GENE.R_Transcript_306458~~R_Transcript_306458.p1 ORF type:complete len:970 (+),score=191.05,tRNA-synt_1|PF00133.18|5.1e-200,tRNA-synt_1|PF00133.18|1.7e+03,Anticodon_1|PF08264.9|4.2e-37,tRNA-synt_1g|PF09334.7|5.6e-09,tRNA-synt_1g|PF09334.7|2.1e-12,Val_tRNA-synt_C|PF10458.5|2.1e-15,tRNA-synt_1_2|PF13603.2|1,tRNA-synt_1_2|PF13603.2|4.4e-07 R_Transcript_306458:179-3088(+)
ATGGCATTACTAGCCTCTCCCTCATCCCTTATCTCTACTTGTTCAGTTCGTAGACTCAACCCCCTCTTTCTTTCTTCTCAACGCCTCGTTATTAGGATTTCCTCACCTCATGTTGCTCGTTTTAAGTCCCGCCTCTTCTCCGTGTCAGCTTCACAAAACGGCATTTTTACTTCTCCGGAGATTGCCAAATCTTTTGATTTTAGTTGGGAGGAGCGCATTTACAACTGGTGGGAGTCTCAAGGTTACTTCAAGCCAAACCTGGACCAAGGAGGTGACCCATTCATAATTTCTATGCCACCACCTAATGTCACTGGATCTTTGCATATGGGGCATGCAATGTTTGTAACTCTTGAGGATATTATGGTTAGATACCACCGGATGAAGGGAAGACCTACTCTTTGGATTCCTGGTACTGACCATGCTGGCATTGCTACTCAGCTGGTTGTAGAAAAAATGCTTGCCTCTGAAGGAATAAAGAGATCTGACTTGGATAGAGATGAGTTCATAAATCGTGTTTGGGAGTGGAAAGACAAATATGGTGGAACCATCATCCAACAAATCAAAAGACTTGGTGCTTCGTGCGATTGGACTCGAGAGCATTTCACTCTTGATGAGCAGCTAAGTCGAGCTGTTATTGAAGCCTTTGTAAGGCTACATGAGAAAGGCTTGATATACCAAGGTTCGTACATGGTCAATTGGTCTCCTAACCTCCAAACAGCTGTTTCAGACTTGGAAGTAGAGTATTCTGAAGAACCTGGTGCTCTTTATTATATTAAGTACCGTGTTGCTGGAGGATCAAGGGATGACTATTTGACAATCGCCACAACGCGGCCAGAGACCCTATTTGGTGATACAGCTGTTGCAGTTCATCCTGAGGATGAACGCTACGCAAAATATGTAGGCTGTCAGGCAATCGTTCCAATGACTTATGGTCGTCATGTCCCAATTATTTCAGATAAGTATGTCGAAAGAGCATTTGGGACTGGTGTTCTGAAAATTAGCCCTGGACATGATCACAATGACTATCTTCTTGCTAGAAAGCTTGGGCTACCCATACTTAATGTTATGAATAAGAACGGAACATTGAATGAAGTTGCTGGACTTTACTGTGGACTTGATCGTTTTGAGGCAAGAAAGAAACTTTGGGAGCATCTTGAAGAAATGGGCTTGGCTGTCAAAAAGGAATCCCACACCTTGCGAGTTCCTAGATCTCAGAGAGGTGGTGAAATAATCGAGCCATTAGTTAGCAAGCAATGGTTTGTGACAATGGAGCCACTAGCAGAGAAAGCCCTGCAGGCAGTTGAAAAAGGCGACCTGACCATCATACCTGAAAGATTTGAGAAGATCTATAATCATTGGTTATCAAATATCAAGGACTGGTGCATAAGTAGACAGTTGTGGTGGGGTCATCGGATACCAGTTTGGTATATCGTGGGTAAAGATTCTGAAGAAGAATATATCGTTGCGAAGAGTCATGGAGAAGCCCTTCATAAGGCCCAGCAGAAATATGGAAAAGATGTAGAGATCTATCAGGATCCAGACGTCCTGGACACTTGGTTTTCAAGTGCATTGTGGCCCTTCAGCACACTGGGATGGCCTGATGTATCAGATGAGGATTTTAAAAGGTTTTACCCAACAACAGTTCTTGAAACAGGGCACGACATTCTGTTCTTTTGGGTGGCAAGAATGGTTATGATGGGAATTGAGTTCACAGGAAATGTTCCTTTCAATTATGTGTATTTGCATGGCCTCATTCGAGACTCTCAGGGGCGAAAAATGTCTAAAACATTGGGAAATGTTATTGATCCTGTTGACACAGTCAAGGAGTTTGGAACTGATGCATTAAGATTTGCACTTTCTCTGGGAACTTCTGGTCAGGATCTTAATTTATCAACTGAAAGATTAATGTCAAACAAGGCTTTCACTAATAAGCTGTGGAATGCTGGCAAGTTTGTGCTGCAGAATTTGCCTAGCCAAAATGATCTTTCTGCTTGGGAAAATCTACTTGAATACAAGTTTGATAATGAGTATTCACTTCATAAGCTGCGATTGCCAGAGTGCTGGGTGGTATCAAAACTTCATATGCTTATTGACCTAGTGACCACAAGCTATGAGAAATTTTATTTTGGCGATGTTGCTAGGGAAACATATGATTTCTTCTGGGGGGATTTTGCTGATTGGTACATTGAAGCTAGCAAAGCTCATCTCTACAAGTCTGGAGACAACACAGTAGCCTTAGCAGCACAAGCAGTACTTTTGTATGTCTTTGAAAACATATTGAAGATACTGCATCCTTTTATGCCATTTGTTACTGAAGCTCTTTGGCAGGCACTACCCAATCGAAAGGAGCCTCTAATTGTGTCTTCATGGCCACAAACTTCACTTCCATCATATTCAACTGTCATAAAAAGATTTGAGAATTTGCAAGCCTTGACTAGAGCTATTCGTAATGCTCGAGCCGAATACTCCGTGGAGCCAGCAAAATGGATATCTGCTACTATAGTTGCAAATCCTGAAGTTCTTCAGTACATATCAGAAGAGAAGGAAGTTTTGGCTCTCCTTTCCCGGCTGGATCTGCAAGCCGTGCATTTTACAGAATCACTTCCAGGAGATGCAAACCAATCTGTCCACCTAGTTGCCAGTGAAGGTTTGGAGGCATACCTGCCTCTTGTCGATATGGTGGATATATCTGCTGAAGTGCAGCGGCTTCTGAAGCGTCTTGTGAAGATGGAAGGGGAGTATAAAGGGCTTACAGCCCGACTTAGTTCTCCTGAGTTTGTAGAAAAGGCTCCTGAAGAAGTTGTCCGAGGTGCTCAAGAAAAGGCAAAAGAAATGGAAGAGAAGATAAATTTAACCAAAAACCGTATAGCTTTCCTTGAATCAACGGCATCAGTGTCAGCAAGAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_306458.p1 GENE.R_Transcript_306458~~R_Transcript_306458.p1 ORF type:complete len:970 (+),score=191.05,tRNA-synt_1|PF00133.18|5.1e-200,tRNA-synt_1|PF00133.18|1.7e+03,Anticodon_1|PF08264.9|4.2e-37,tRNA-synt_1g|PF09334.7|5.6e-09,tRNA-synt_1g|PF09334.7|2.1e-12,Val_tRNA-synt_C|PF10458.5|2.1e-15,tRNA-synt_1_2|PF13603.2|1,tRNA-synt_1_2|PF13603.2|4.4e-07 R_Transcript_306458:179-3088(+)
MALLASPSSLISTCSVRRLNPLFLSSQRLVIRISSPHVARFKSRLFSVSASQNGIFTSPEIAKSFDFSWEERIYNWWESQGYFKPNLDQGGDPFIISMPPPNVTGSLHMGHAMFVTLEDIMVRYHRMKGRPTLWIPGTDHAGIATQLVVEKMLASEGIKRSDLDRDEFINRVWEWKDKYGGTIIQQIKRLGASCDWTREHFTLDEQLSRAVIEAFVRLHEKGLIYQGSYMVNWSPNLQTAVSDLEVEYSEEPGALYYIKYRVAGGSRDDYLTIATTRPETLFGDTAVAVHPEDERYAKYVGCQAIVPMTYGRHVPIISDKYVERAFGTGVLKISPGHDHNDYLLARKLGLPILNVMNKNGTLNEVAGLYCGLDRFEARKKLWEHLEEMGLAVKKESHTLRVPRSQRGGEIIEPLVSKQWFVTMEPLAEKALQAVEKGDLTIIPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYIVGKDSEEEYIVAKSHGEALHKAQQKYGKDVEIYQDPDVLDTWFSSALWPFSTLGWPDVSDEDFKRFYPTTVLETGHDILFFWVARMVMMGIEFTGNVPFNYVYLHGLIRDSQGRKMSKTLGNVIDPVDTVKEFGTDALRFALSLGTSGQDLNLSTERLMSNKAFTNKLWNAGKFVLQNLPSQNDLSAWENLLEYKFDNEYSLHKLRLPECWVVSKLHMLIDLVTTSYEKFYFGDVARETYDFFWGDFADWYIEASKAHLYKSGDNTVALAAQAVLLYVFENILKILHPFMPFVTEALWQALPNRKEPLIVSSWPQTSLPSYSTVIKRFENLQALTRAIRNARAEYSVEPAKWISATIVANPEVLQYISEEKEVLALLSRLDLQAVHFTESLPGDANQSVHLVASEGLEAYLPLVDMVDISAEVQRLLKRLVKMEGEYKGLTARLSSPEFVEKAPEEVVRGAQEKAKEMEEKINLTKNRIAFLESTASVSARV*

Click here to download the sequence:
Link to NCBI Protein BLAST