Transcript Information: R_Transcript_30696.p1


Annotated TAIR IDAT5G19330.1
Annotated Gene NameARM repeat protein interacting with ABF2
Annotated Gene Symbol(s)ARIA
Annotation TypeOrtholog
Chromosome Positionchr5:6508095-6512701 | Reverse length=710
E-Value1.6E-269
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6113086922603
Replicate 24.009136103112
Replicate 36.6285244618788
Condition 2: 8 Hour
Replicate 14.3862474610223
Replicate 23.9615735545408
Replicate 36.2172839526522
Condition 3: 24 Hour
Replicate 16.5529174173565
Replicate 24.8625767632769
Replicate 37.0661093871086


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30696.p1 GENE.R_Transcript_30696~~R_Transcript_30696.p1 ORF type:complete len:508 (+),score=112.25,Arm|PF00514.19|0.51,Arm|PF00514.19|2.2e-08,Arm|PF00514.19|7.4e-07,Arm|PF00514.19|0.18,Arm|PF00514.19|0.00041,Arm|PF00514.19|0.012,Arm|PF00514.19|6e+02,Arm|PF00514.19|51,Arm|PF00514.19|0.75,HEAT_2|PF13646.2|0.0017,HEAT_2|PF13646.2|3.4e-06,HEAT_2|PF13646.2|4e-05,HEAT_2|PF13646.2|0.0027,HEAT_2|PF13646.2|18,BTB|PF00651.27|4.8e-16,HEAT|PF02985.18|0.057,HEAT|PF02985.18|0.89,HEAT|PF02985.18|14,HEAT|PF02985.18|0.12,HEAT|PF02985.18|65,HEAT|PF02985.18|4.4e+03,HEAT|PF02985.18|2.6e+03,HEAT_EZ|PF13513.2|0.00082,HEAT_EZ|PF13513.2|0.0073,HEAT_EZ|PF13513.2|0.012,HEAT_EZ|PF13513.2|1.7e+02,HEAT_EZ|PF13513.2|7.8e+03,Atx10homo_assoc|PF09759.5|0.011,Atx10homo_assoc|PF09759.5|16,Atx10homo_assoc|PF09759.5|4e+02,Atx10homo_assoc|PF09759.5|73,V-ATPase_H_N|PF03224.10|0.021,V-ATPase_H_N|PF03224.10|0.011,Adaptin_N|PF01602.16|0.0052,Adaptin_N|PF01602.16|2.8 R_Transcript_30696:278-1801(+)
ATGAATCCACTGCTGTTTTTCTATCGTCACGGTGATGATTCTCATACTGCTTCTAGCATTAAGCCTCAATATCAGCAACTAATAGTCGATGCTGATTCTCTGCAACACCTTGTTTCTCTTTTAAAAAGGAGTAAGAACAGCTGTAATTCTCGATCTGTCCATGGCGTCATCAGAAGAGCAGCTGATGCAGTAACTAACCTTGCTCATGAGAATAGTAACATCAAATCTTGTGTCAGGCTTGAAGGTGGCATTCCACCCCTTGTTGAACTCCTAGATTCTTCTGATGTTAAAGTCCAGAGAGCAGCAGCAGGGGCCCTGCGGACCCTTGCATTTAAAAATGATGAAAACAAAAACCAGATTGTTGAATTCAATGCTCTTCCTACCCTAATTTTGATGCTTCGGTCTGAGGATCCAGCTGTTCATTATGAAGCGGTTGGTGTAATTGGTAATTTGGTTCACTCCTCTCCTAACATAAAGAAAGAAGTTCTCCTTGCTGGTGCTTTGCAGCCTGTCATTGGGCTACTAAGCTCCACCTGTCCCGAGAGCAAAAGAGAAGCAGCGTTACTACTTGGGCAGTTTGCAGCAGCAGATTCAGATTGCAAGGTGCACATTGTCCAGAGAGGTGCTGTCCCACCTTTAATTAAGATGCTTGAGTCAACAGATACACAACTCATGGAAATGTCAGCTTTTGCACTAGGAAGATTAGCCCAAGATTCACATAATCAAGCTGGCATTGTCCAAAGTGGTGGCATCATGCCATTATTGGAACTTCTTGATTCGAGGAATGGCTCTCTACAACATAATGCTGCATTTGCATTATATGGACTTGCAGACAATGAGGATAATGTTGCAGATCTTATCAAGGTTGGTGGTGTTCAAAAACTCCAGGAAGGGGATTTCATTGTTCAGCCAACTAAGGATTGTGTGGCAAAGGCTCTAAAAAGATTGGAGGAAAAGATCCAAGGGCGGGTGCTAAACCATTTGTTGTATCTAATGCGAGTAGCGGATAAAATTGTACAAAGTCGGATTGCTTTAGCTCTTGCTCATCTTTGTTCCCCTGAACATCACAGGCGAATCTTCATTGACAACAACGGGTTGCAAGTGCTGCTGGAGCTTCTTGAATCTCCGGATATTAAAGAGCAAGAAGATGGTTCCATGGCCTTGTATAAGATGGCCTGCAAAGCCACAATGCTGTCACCCATTGATGCAGCTCCTCCATCGCCAACCCCGCAGGTATATTTGGGTGTGCAGTATGTAAATAATTCAACGTTGTCAGATGTTACCTTCCTGATTGAAGGTAGGAGGTTTTATGCCCACCGAATATGTCTTCTTGCATCTTCTGATGCATTTCGTGCAATGTTTGATGGTGGTTACCGGGAGAAGGATGCCAATGACATTGAGATTCCAAATATTAGATGGAATGTTTTTGAATTGATGATGAGATATATATATATACAGGCTCGGTTAATGTCAATTTGGACATCACACAGGACTTGCTTAGAGCTGCTGACCAGTATCTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30696.p1 GENE.R_Transcript_30696~~R_Transcript_30696.p1 ORF type:complete len:508 (+),score=112.25,Arm|PF00514.19|0.51,Arm|PF00514.19|2.2e-08,Arm|PF00514.19|7.4e-07,Arm|PF00514.19|0.18,Arm|PF00514.19|0.00041,Arm|PF00514.19|0.012,Arm|PF00514.19|6e+02,Arm|PF00514.19|51,Arm|PF00514.19|0.75,HEAT_2|PF13646.2|0.0017,HEAT_2|PF13646.2|3.4e-06,HEAT_2|PF13646.2|4e-05,HEAT_2|PF13646.2|0.0027,HEAT_2|PF13646.2|18,BTB|PF00651.27|4.8e-16,HEAT|PF02985.18|0.057,HEAT|PF02985.18|0.89,HEAT|PF02985.18|14,HEAT|PF02985.18|0.12,HEAT|PF02985.18|65,HEAT|PF02985.18|4.4e+03,HEAT|PF02985.18|2.6e+03,HEAT_EZ|PF13513.2|0.00082,HEAT_EZ|PF13513.2|0.0073,HEAT_EZ|PF13513.2|0.012,HEAT_EZ|PF13513.2|1.7e+02,HEAT_EZ|PF13513.2|7.8e+03,Atx10homo_assoc|PF09759.5|0.011,Atx10homo_assoc|PF09759.5|16,Atx10homo_assoc|PF09759.5|4e+02,Atx10homo_assoc|PF09759.5|73,V-ATPase_H_N|PF03224.10|0.021,V-ATPase_H_N|PF03224.10|0.011,Adaptin_N|PF01602.16|0.0052,Adaptin_N|PF01602.16|2.8 R_Transcript_30696:278-1801(+)
MNPLLFFYRHGDDSHTASSIKPQYQQLIVDADSLQHLVSLLKRSKNSCNSRSVHGVIRRAADAVTNLAHENSNIKSCVRLEGGIPPLVELLDSSDVKVQRAAAGALRTLAFKNDENKNQIVEFNALPTLILMLRSEDPAVHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSTCPESKREAALLLGQFAAADSDCKVHIVQRGAVPPLIKMLESTDTQLMEMSAFALGRLAQDSHNQAGIVQSGGIMPLLELLDSRNGSLQHNAAFALYGLADNEDNVADLIKVGGVQKLQEGDFIVQPTKDCVAKALKRLEEKIQGRVLNHLLYLMRVADKIVQSRIALALAHLCSPEHHRRIFIDNNGLQVLLELLESPDIKEQEDGSMALYKMACKATMLSPIDAAPPSPTPQVYLGVQYVNNSTLSDVTFLIEGRRFYAHRICLLASSDAFRAMFDGGYREKDANDIEIPNIRWNVFELMMRYIYIQARLMSIWTSHRTCLELLTSIC*

Click here to download the sequence:
Link to NCBI Protein BLAST