Transcript Information: R_Transcript_30698.p1


Annotated TAIR IDAT5G19330.1
Annotated Gene NameARM repeat protein interacting with ABF2
Annotated Gene Symbol(s)ARIA
Annotation TypeOrtholog
Chromosome Positionchr5:6508095-6512701 | Reverse length=710
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.296542077021
Replicate 210.444313540415
Replicate 38.4872399554975
Condition 2: 8 Hour
Replicate 19.3548560952296
Replicate 29.718383261746
Replicate 310.844423780898
Condition 3: 24 Hour
Replicate 111.155139665769
Replicate 210.999353472352
Replicate 39.8775282689588


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30698.p1 GENE.R_Transcript_30698~~R_Transcript_30698.p1 ORF type:5prime_partial len:780 (+),score=148.85,Arm|PF00514.19|0.083,Arm|PF00514.19|0.00017,Arm|PF00514.19|3.7e-08,Arm|PF00514.19|1.3e-06,Arm|PF00514.19|0.3,Arm|PF00514.19|0.00069,Arm|PF00514.19|0.02,Arm|PF00514.19|9.7e+02,Arm|PF00514.19|85,Arm|PF00514.19|1.2,BTB|PF00651.27|1.6e-24,HEAT_2|PF13646.2|2.7e+03,HEAT_2|PF13646.2|32,HEAT_2|PF13646.2|0.0016,HEAT_2|PF13646.2|6.1e-06,HEAT_2|PF13646.2|8.7e-06,HEAT_2|PF13646.2|13,HEAT_2|PF13646.2|32,HEAT_EZ|PF13513.2|85,HEAT_EZ|PF13513.2|0.0015,HEAT_EZ|PF13513.2|0.021,HEAT_EZ|PF13513.2|0.02,HEAT_EZ|PF13513.2|2.8e+02,HEAT_EZ|PF13513.2|1.6e+04,HEAT_EZ|PF13513.2|5.9e+03,HEAT|PF02985.18|1.3e+04,HEAT|PF02985.18|0.097,HEAT|PF02985.18|1.5,HEAT|PF02985.18|24,HEAT|PF02985.18|0.2,HEAT|PF02985.18|1.1e+02,HEAT|PF02985.18|7.3e+03,HEAT|PF02985.18|4.6e+03,V-ATPase_H_N|PF03224.10|3.1e+02,V-ATPase_H_N|PF03224.10|0.21,V-ATPase_H_N|PF03224.10|0.019,Atx10homo_assoc|PF09759.5|0.019,Atx10homo_assoc|PF09759.5|27,Atx10homo_assoc|PF09759.5|7.1e+02,Atx10homo_assoc|PF09759.5|1.1e+02 R_Transcript_30698:2-2341(+)
TTCATCGTCTCCCCCCCGAAAAAAAAAAAGAAAAACAAAAACAAAAGACACAACCCAGACATAATACACAGGAAAAGAATTCTCTATTTTTCACTCACTTTCCCCAAACTACCCCTCTCTCTCTCTCCCCCCATTTCCTCATCCTCTCTTTCTCTCTCCTCTGGTCTGCAGCCTGCCATGGATCGTGGCGAGCGAAGATCAGGGAGCGCTCGAAGGAGCTTAAAACGCAAACTTGAAGAAGATTTTCATGAAAATTTCCGCAACAACGATAACTTCGAAGATCTTCCTCTTTCTGAACGCCAACACGAGCTTCATAATCATCATCATCATCAACAACATCACAATCATCAAGATCTGAATGCTGAAATCACTGCTCAAGTTGAAGTTCTCAAAGGAGCTCTATCGTGGTCCGAAACCGATCGAACTTCCGCTAAACGCGCCTCTCATTTCCTCTCTGAGCTCGCCAAGAACGAGGATTTGGTGAATTTGATTGTGGATTGTGGAGCGGTACCGGCTTTAGTGATGCATCTTCAAGCGCCGAGGCATGAGAGCGTTTCGAAACCTCTTGAGCATGAGGTTGAGAAAGCAAGTGCTTTTGCACTTGGACTTTTGGCTGTTAAGCCGGAGCATCAGCAACTAATAGTCGATGCTGGTGCGTTGCCTCATCTTGTTGCTCTTTTAAAAAGGAGTAAGAACAGCTGTAATTCTCGATCTGTCCATGGCGTCATCAGAAGAGCAGCTGATGCAGTAACTAACCTTGCTCATGAGAATAGTAACATCAAATCTTGTGTCAGGCTTGAAGGTGGCATTCCACCCCTTGTTGAACTCCTAGATTCTTCTGATGTTAAAGTCCAGAGAGCAGCAGCAGGGGCCCTGCGGACCCTTGCATTTAAAAATGATGAAAACAAAAACCAGATTGTTGAATTCAATGCTCTTCCTACCCTAATTTTGATGCTTCGGTCTGAGGATCCAGCTGTTCATTATGAAGCGGTTGGTGTAATTGGTAATTTGGTTCACTCCTCTCCTAACATAAAGAAAGAAGTTCTCCTTGCTGGTGCTTTGCAGCCTGTCATTGGGCTACTAAGCTCCACCTGTCCCGAGAGCAAAAGAGAAGCAGCGTTACTACTTGGGCAGTTTGCAGCAGCAGATTCAGATTGCAAGGTGCACATTGTCCAGAGAGGTGCTGTCCCACCTTTAATTAAGATGCTTGAGTCAACAGATACACAACTCATGGAAATGTCAGCTTTTGCACTAGGAAGATTAGCCCAAGATTCACATAATCAAGCTGGCATTGTCCAAAGTGGTGGCATCATGCCATTATTGGAACTTCTTGATTCGAGGAATGGCTCTCTACAACATAATGCTGCATTTGCATTATATGGACTTGCAGACAATGAGGATAATGTTGCAGATCTTATCAAGGTTGGTGGTGTTCAAAAACTCCAGGAAGGGGATTTCATTGTTCAGCCAACTAAGGATTGTGTGGCAAAGGCTCTAAAAAGATTGGAGGAAAAGATCCAAGGGCGGGTGCTAAACCATTTGTTGTATCTAATGCGAGTAGCGGATAAAATTGTACAAAGTCGGATTGCTTTAGCTCTTGCTCATCTTTGTTCCCCTGAACATCACAGGCGAATCTTCATTGACAACAACGGGTTGCAAGTGCTGCTGGAGCTTCTTGAATCTCCGGATATTAAAGAGCAAGAAGATGGTTCCATGGCCTTGTATAAGATGGCCTGCAAAGCCACAATGCTGTCACCCATTGATGCAGCTCCTCCATCGCCAACCCCGCAGGTATATTTGGGTGTGCAGTATGTAAATAATTCAACGTTGTCAGATGTTACCTTCCTGATTGAAGGTAGGAGGTTTTATGCCCACCGAATATGTCTTCTTGCATCTTCTGATGCATTTCGTGCAATGTTTGATGGTGGTTACCGGGAGAAGGATGCCAATGACATTGAGATTCCAAATATTAGATGGAATGTTTTTGAATTGATGATGAGATATATATATACAGGCTCGGTTAATGTCAATTTGGACATCACACAGGACTTGCTTAGAGCTGCTGACCAGTATCTGTTAGAAGGTCTTAAGCGGCTGTGTGAGTGTGCTATTGCGCAGGATATATCAGAAGACAATGTTACACTCATGTATGAATTGTCTGAGGCATATAATGCAGTCTCATTACGGCATTCTTGTATCTTGTTTATCTTGGAGCATTTTGACAGATTAAGTTCCAAACCCTGGTATCCTCGCTTAATTCAGCGAATTATACCCGAGATCAGTGAGTATTTTGAAAAAGTACTCACTAAGTCTAATTTTGTCGAAGTGACTCAAGCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30698.p1 GENE.R_Transcript_30698~~R_Transcript_30698.p1 ORF type:5prime_partial len:780 (+),score=148.85,Arm|PF00514.19|0.083,Arm|PF00514.19|0.00017,Arm|PF00514.19|3.7e-08,Arm|PF00514.19|1.3e-06,Arm|PF00514.19|0.3,Arm|PF00514.19|0.00069,Arm|PF00514.19|0.02,Arm|PF00514.19|9.7e+02,Arm|PF00514.19|85,Arm|PF00514.19|1.2,BTB|PF00651.27|1.6e-24,HEAT_2|PF13646.2|2.7e+03,HEAT_2|PF13646.2|32,HEAT_2|PF13646.2|0.0016,HEAT_2|PF13646.2|6.1e-06,HEAT_2|PF13646.2|8.7e-06,HEAT_2|PF13646.2|13,HEAT_2|PF13646.2|32,HEAT_EZ|PF13513.2|85,HEAT_EZ|PF13513.2|0.0015,HEAT_EZ|PF13513.2|0.021,HEAT_EZ|PF13513.2|0.02,HEAT_EZ|PF13513.2|2.8e+02,HEAT_EZ|PF13513.2|1.6e+04,HEAT_EZ|PF13513.2|5.9e+03,HEAT|PF02985.18|1.3e+04,HEAT|PF02985.18|0.097,HEAT|PF02985.18|1.5,HEAT|PF02985.18|24,HEAT|PF02985.18|0.2,HEAT|PF02985.18|1.1e+02,HEAT|PF02985.18|7.3e+03,HEAT|PF02985.18|4.6e+03,V-ATPase_H_N|PF03224.10|3.1e+02,V-ATPase_H_N|PF03224.10|0.21,V-ATPase_H_N|PF03224.10|0.019,Atx10homo_assoc|PF09759.5|0.019,Atx10homo_assoc|PF09759.5|27,Atx10homo_assoc|PF09759.5|7.1e+02,Atx10homo_assoc|PF09759.5|1.1e+02 R_Transcript_30698:2-2341(+)
FIVSPPKKKKKNKNKRHNPDIIHRKRILYFSLTFPKLPLSLSPPISSSSLSLSSGLQPAMDRGERRSGSARRSLKRKLEEDFHENFRNNDNFEDLPLSERQHELHNHHHHQQHHNHQDLNAEITAQVEVLKGALSWSETDRTSAKRASHFLSELAKNEDLVNLIVDCGAVPALVMHLQAPRHESVSKPLEHEVEKASAFALGLLAVKPEHQQLIVDAGALPHLVALLKRSKNSCNSRSVHGVIRRAADAVTNLAHENSNIKSCVRLEGGIPPLVELLDSSDVKVQRAAAGALRTLAFKNDENKNQIVEFNALPTLILMLRSEDPAVHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSTCPESKREAALLLGQFAAADSDCKVHIVQRGAVPPLIKMLESTDTQLMEMSAFALGRLAQDSHNQAGIVQSGGIMPLLELLDSRNGSLQHNAAFALYGLADNEDNVADLIKVGGVQKLQEGDFIVQPTKDCVAKALKRLEEKIQGRVLNHLLYLMRVADKIVQSRIALALAHLCSPEHHRRIFIDNNGLQVLLELLESPDIKEQEDGSMALYKMACKATMLSPIDAAPPSPTPQVYLGVQYVNNSTLSDVTFLIEGRRFYAHRICLLASSDAFRAMFDGGYREKDANDIEIPNIRWNVFELMMRYIYTGSVNVNLDITQDLLRAADQYLLEGLKRLCECAIAQDISEDNVTLMYELSEAYNAVSLRHSCILFILEHFDRLSSKPWYPRLIQRIIPEISEYFEKVLTKSNFVEVTQA*

Click here to download the sequence:
Link to NCBI Protein BLAST