Transcript Information: R_Transcript_307038.p1


Annotated TAIR IDAT1G77010.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28942710-28944797 | Forward length=695
E-Value3E-265
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.32306125583573
Replicate 20.092903984142912
Replicate 30.067571497333783
Condition 2: 8 Hour
Replicate 10.32503360549441
Replicate 20.23086456178215
Replicate 30.40158430576077
Condition 3: 24 Hour
Replicate 10.44019394389403
Replicate 20.32529880369583
Replicate 30.29054475248094


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_307038.p1 GENE.R_Transcript_307038~~R_Transcript_307038.p1 ORF type:complete len:678 (+),score=108.38,PPR|PF01535.16|0.0037,PPR|PF01535.16|7.3e-05,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|1.9,PPR|PF01535.16|0.014,PPR|PF01535.16|5.6e-06,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|0.0071,PPR|PF01535.16|0.00026,PPR|PF01535.16|0.00016,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.14,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|0.00038,PPR|PF01535.16|0.00071,PPR|PF01535.16|67,PPR|PF01535.16|3.8e+02,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|0.0049,PPR_2|PF13041.2|2e+03,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|6e-12,PPR_2|PF13041.2|0.074,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|0.00031,PPR_2|PF13041.2|2.6,PPR_2|PF13041.2|1.3e-12,PPR_2|PF13041.2|15,PPR_2|PF13041.2|0.2,PPR_2|PF13041.2|1.2e+03,PPR_3|PF13812.2|0.7,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|0.00051,PPR_3|PF13812.2|25,PPR_3|PF13812.2|10,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|8,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|0.36,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|13,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|8.9e-05,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|38,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.004,PPR_1|PF12854.3|2.1e-05,PPR_1|PF12854.3|0.16,PPR_1|PF12854.3|3.9e+02,PPR_1|PF12854.3|0.0024,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|55,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.0053,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|3.2,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.018 R_Transcript_307038:57-2090(+)
ATGGATTTCGACTTTCGTTATTATTCTCAGTTGTTACAATCTTGCAATAATACCCATAATAATCAAGGCAAACAGCTCCATACCCTCTTCCTCAAAAAGGGTATATTTTACTCTGCCATAACTATAGCAAACCGTCTTCTACAGATGTATGTGAAATCTGGTGCCATGCGTGATGCAGATAAACTGTTCGACGAAATGCCCCTGAGAAACTGCTTCTCTTGGAATACCATGATTGAGGGCTACATGAAGTTGGGTTACAGAGATAAGTCATTGGAGCTTTTTAGTTGTATGCCCTATAAGGACGAGTTCTCGTGGAATATGGTGATTTCAGGGTGTGCAAAGATGGGTGACTTGGATTCAGCCAGGATTTTGTTTGATCAAATGCCTAGGAAAAATGGGTTTGCTTGGAATTCTATGATTCATGGGTATGCTCGTCGTGGGTGTCCTTTGGATGCTTTGAGGATGTTCAAGGATTTGAACTTTGACCTTAACGAAGTGTGGATGAAGGATGGTTTTGTTATGGCAACTGTGATTGGTGCTTGCACTGACTTGTTGGCTCTTGAATGTGGGAAGCAAATCCATGCTCGACTCGTCATTGATGAGGTGGAGTTTGATTCGGTGTTGGGAAGTTCACTTGTTAATTTGTATAGCAAGTGTAGGGATTTAGATAGTGCAAGTAATGTTGTGCGATTGATGATGGAAGTTGATGACTTCTCACTTTCTGCATTGATCACAGGCTATGCAAATGCAGGTAGAATGAATGATGCTAGAAGAATTTTCAATAGTATTGTTAGTCCTTGTGTTGTGGTTTGGAATTCATTGATTTCTGGGTATGTCACTAATAGTGACGGGATAGAGGCACTAGTTCTATATAACATGATGAGAAATAATGGTTTCAAACCAGATTGCTCTACCTTTGCTAGTGTTTTGAATGCTTGTGCAGCTACTGGCATTCTTGAACATGGTAAACAACTGCACACTCATGCTTACGAAGTTGGAGTCTCACAGGATGTTGTTGTTGCATGTTCCCTTATTGATATGTATTCCAAATGCAGAAGTCCAGATGATGCTTGCAAGTTTTTTGATGAGCTTAAGTCTTATGATACTGTTCTCCTTAATTCGATGATCAATGTGTACAATAACTGTGGAAGAGTGCAGGAAGCCAAGCAGATATTTGACAGTATGCCGCATAAAACCTTGATCTCATGGAATTCAATGCTAGTGGGCCTTACTCAAAATGGATATCCCCTTTTAGCTTTGGGCCTCTTTTGCGAGATGAATAGGCTGGCAATGGGAATGGACAAGTATAGTCTTGCCAGTGTGATCAGTGCTTGTGCGAGCATTACTTCATTTGAACTTGGTGAGCAAGTTTTTGCAAAAGCTACCATTGTTGGCCTTGACAATGACCTGATTGTTTGTACCTCACTTATCGATTTCTATTGTAAGTGTGGTTTTATTAACTTGGGTCGAAAATTGTTCAATGGGATCAACAAGTCTGATCAAGCATCTTGGAATTCCATTTTAACGGGGTATGCCACAAATGGCCATGCTATAGAGGCATTGGATTTGTTCGCCTACATGAGACAAGCTGGAGTGAAACCCAATGATATTACATTTACAATAGTTCTATCTGCTTGCAATCATTGTGGTCTAATTGAGGAAGCCAGGAAGTGGTTTCATTTGATGCAATCTGATTATAATATAGAACCGGGATACGAACATTACTCCTGTATGATTGATCTGTTGGCTCGGGCTGGATGCCTTGAAGAAGCAATGGCTCTGATTGCGCAAATGCCTTTCAAGGCAGATGCAAGCATATGGTCTTCAGTACTGAGAGGGTGCGTGGCCCATGGTAATAGCAGACTGGGTAAGCAGGTAGCAAATATAATCATTGATTTTGATCCTGAAAATTCGACTGCTTATGTGCAGTTATCTGGTATGTTTGCTACTTCAGGCAATTGGGAAGGATCAACTCAAATTAGAGATATGATGAAAAGTAAACACATTGAAAAGAACTCTGGTATCAGTTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_307038.p1 GENE.R_Transcript_307038~~R_Transcript_307038.p1 ORF type:complete len:678 (+),score=108.38,PPR|PF01535.16|0.0037,PPR|PF01535.16|7.3e-05,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|1.9,PPR|PF01535.16|0.014,PPR|PF01535.16|5.6e-06,PPR|PF01535.16|2.7e+03,PPR|PF01535.16|0.0071,PPR|PF01535.16|0.00026,PPR|PF01535.16|0.00016,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|0.14,PPR|PF01535.16|5.4e-05,PPR|PF01535.16|0.00038,PPR|PF01535.16|0.00071,PPR|PF01535.16|67,PPR|PF01535.16|3.8e+02,PPR_2|PF13041.2|0.0038,PPR_2|PF13041.2|0.012,PPR_2|PF13041.2|2.6e-05,PPR_2|PF13041.2|0.0049,PPR_2|PF13041.2|2e+03,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|6e-12,PPR_2|PF13041.2|0.074,PPR_2|PF13041.2|0.0017,PPR_2|PF13041.2|0.00031,PPR_2|PF13041.2|2.6,PPR_2|PF13041.2|1.3e-12,PPR_2|PF13041.2|15,PPR_2|PF13041.2|0.2,PPR_2|PF13041.2|1.2e+03,PPR_3|PF13812.2|0.7,PPR_3|PF13812.2|0.4,PPR_3|PF13812.2|0.00051,PPR_3|PF13812.2|25,PPR_3|PF13812.2|10,PPR_3|PF13812.2|0.21,PPR_3|PF13812.2|8,PPR_3|PF13812.2|2.1e+02,PPR_3|PF13812.2|0.36,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|13,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|8.9e-05,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|4.9e+03,PPR_3|PF13812.2|38,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.004,PPR_1|PF12854.3|2.1e-05,PPR_1|PF12854.3|0.16,PPR_1|PF12854.3|3.9e+02,PPR_1|PF12854.3|0.0024,PPR_1|PF12854.3|2.6,PPR_1|PF12854.3|55,PPR_1|PF12854.3|13,PPR_1|PF12854.3|0.0053,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.17,PPR_1|PF12854.3|3.2,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.018 R_Transcript_307038:57-2090(+)
MDFDFRYYSQLLQSCNNTHNNQGKQLHTLFLKKGIFYSAITIANRLLQMYVKSGAMRDADKLFDEMPLRNCFSWNTMIEGYMKLGYRDKSLELFSCMPYKDEFSWNMVISGCAKMGDLDSARILFDQMPRKNGFAWNSMIHGYARRGCPLDALRMFKDLNFDLNEVWMKDGFVMATVIGACTDLLALECGKQIHARLVIDEVEFDSVLGSSLVNLYSKCRDLDSASNVVRLMMEVDDFSLSALITGYANAGRMNDARRIFNSIVSPCVVVWNSLISGYVTNSDGIEALVLYNMMRNNGFKPDCSTFASVLNACAATGILEHGKQLHTHAYEVGVSQDVVVACSLIDMYSKCRSPDDACKFFDELKSYDTVLLNSMINVYNNCGRVQEAKQIFDSMPHKTLISWNSMLVGLTQNGYPLLALGLFCEMNRLAMGMDKYSLASVISACASITSFELGEQVFAKATIVGLDNDLIVCTSLIDFYCKCGFINLGRKLFNGINKSDQASWNSILTGYATNGHAIEALDLFAYMRQAGVKPNDITFTIVLSACNHCGLIEEARKWFHLMQSDYNIEPGYEHYSCMIDLLARAGCLEEAMALIAQMPFKADASIWSSVLRGCVAHGNSRLGKQVANIIIDFDPENSTAYVQLSGMFATSGNWEGSTQIRDMMKSKHIEKNSGISW*

Click here to download the sequence:
Link to NCBI Protein BLAST