Transcript Information: R_Transcript_307226.p1


Annotated TAIR IDAT3G50420.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18710871-18713649 | Reverse length=794
E-Value1.8E-247
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56959594468626
Replicate 20.32760185046706
Replicate 30.29242643739769
Condition 2: 8 Hour
Replicate 10.38204895662368
Replicate 20.25374050316239
Replicate 30.41195144670382
Condition 3: 24 Hour
Replicate 10.32564265571211
Replicate 20.25027244131151
Replicate 30.77615974067012


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_307226.p1 GENE.R_Transcript_307226~~R_Transcript_307226.p1 ORF type:complete len:705 (+),score=107.93,PPR_2|PF13041.2|6.7e+02,PPR_2|PF13041.2|0.00074,PPR_2|PF13041.2|36,PPR_2|PF13041.2|7.6e-09,PPR_2|PF13041.2|10,PPR_2|PF13041.2|5.7e-08,PPR_2|PF13041.2|2.5e+02,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|7,PPR_2|PF13041.2|4.7e-10,PPR_2|PF13041.2|1.7e-06,PPR_2|PF13041.2|34,PPR_2|PF13041.2|3.8e+03,PPR|PF01535.16|15,PPR|PF01535.16|6.2,PPR|PF01535.16|4.4e+03,PPR|PF01535.16|7,PPR|PF01535.16|0.027,PPR|PF01535.16|7.6,PPR|PF01535.16|0.5,PPR|PF01535.16|0.00029,PPR|PF01535.16|50,PPR|PF01535.16|0.0013,PPR|PF01535.16|0.059,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|0.00018,PPR|PF01535.16|0.074,PPR|PF01535.16|68,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.0062,PPR_3|PF13812.2|8.4e+02,PPR_3|PF13812.2|2.4e+03,PPR_3|PF13812.2|40,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|52,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|10,PPR_3|PF13812.2|4.1e+02,PPR_1|PF12854.3|0.43,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|4.4e+02,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|5.6,PPR_1|PF12854.3|75,PPR_1|PF12854.3|0.52,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|6.9,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|4.1,PPR_1|PF12854.3|3.3 R_Transcript_307226:183-2297(+)
ATGCCATCCACAACTGAAGTTTATTCACTAACAAACTTCCTTATACAAAAATGCAACGCCATAAACTCCCTCAAGAAAGCCCGCCAACTCCATGCCCACATCCTTACCTCCTCATCTCCCACCACTTATCAAACACCATTCCTCCACAACAACATCCTCACCATGTATGTAAACTGCGGTTCACTGTTCCATTCCCACCTAGTGTTCGACAAAATGCCTCAAAGAAACATCATTTCTTACAACTCGCTCATTGCAGCCTATGCCCGTCGTCCCAACACCGCCCCTTGTGCGTTTCAACTGCTTGCTCAGATGAGATATGAATGTTTTCGACCAAACGGGCCGACCTTCACCAGCTTATTGCAAACAGCTACCGGAACTGGGGACTATATTACAGGCTTTGCTCTTCATTGTCAAATTGTGAAGTTTGGACTTGTGTTTGATGTGTGTGTTCAAACTGCATTGATTGGTCTTTATAGTAATCTTGGGGATCTTAATTCAGCTAATGAAGTATTTAGAAGTGTACATGTCAAAGATGACATTGCCTGGAATTGTATCATATCAGGGAACTTGAAGAACAACATGATGAGAGAAGGGCTGTGTCATTTCAAGATGATGTTGATGAGCAATGTCAGACCAACCGAGTTCACCTATTCCATTGTACTGAATGCTTGTGCTAGATTGGGTTTTTATTCTTTTGGTCAGCTTACTCACACACAAGTTATGAAGACTGGTGCATATGTAGATTTGCCATTGCAAAATTCGCTGGTGGACATGTACTCGAGCTGTGGTGATACCCAATCAGCGTGTCATGTTTTTAATGAAATTCAGAATCCTGATCTTGTGTCGTGGAACTCGATGATGGCAGGGTATGCAGAGAATCGAGAGGGGGAGAAAGCCATCGATTTTTTTGTCCAACTGCAGCATCAGTCTGCACAAAAACCAGATGAATATACTTTTGCAGCGGTGATCTCTGCCATTAAAGAAAACCCAGCTTCACAATATGGGCAACCACTCCATGCACAAGTCATAACATCTGGATTGGATCAGAGCGTTTTTATTGGGAGTCCACTAATTTCCATGTATTTTGAAAATGAGGGAACTGAAATGGCTGAAGGGGTTTTCAGCTCGATCATTAAGAAAGACGTGGTTCTGTGGACTGAAATGATCACAGGTTATTCTAAAACATTGGATGGTGAAAATGCACTTAAATTCTTCTATATGATGTTGAAAGAAGGCCATAAAGTTGACAGCTTTGCTCTAAGTAGTTCTTTGAGTGTGTGCGCGGATCTTGCAACCTTGAAACAAGGTGAAATGCTTCAATGTCAGACCATTAAAACTGGGTATGATACAGATATGTCAGTCTGTGGTAGTTTGATCGATGCATATTCCAAAAATGGTAACCTACAAGCTGCCAAGTTGATATTTGCTGACGTCACAGACCCTGATTTGAAGTGCTGGAACTCAATGATTGGAGGATATAGTCACCATGGAATGGCAGAGGAATCAATTAAACTCTTTGATGAGATTTTAGTTTCTCGTCTGGAACCAGATCAAGTGACATATATTTCACTGCTTTCAGCTTGTAGTCATTGTGGTTTAGTTGAGAGAGGGAAGTACTTGTGGAATTCTATGAAACAAAAGGGCATAACTCCTGGGTTTAAGCACTATTCTTGCATGGTGAGTCTGCTAAGTCGAGCAGGGTTGCTAGAAGACGCCATGGCAATTATAAATGAGTCACCGTTCAGTGAGAATTGTCTTGAACTGTGGAGGACTGTGTTAAGTTCATCTGTTTCTAGTAGAAACTTAGCTGCAGGACTAAATGCAGCTGGGAAAATATTACAAGTGAATGATCGGGACAGTGCAACACATTCCTTGCTTTTGAATCTATATGCTGCTGTGGGTAGATGGGACGGCGTTGTGGAAACAAGGAAGAGGATAAGAGGACTGATGTTGGAAAAGGATCCAGGATTGAGCTGGGTTGAGGCTGGCAAGAGCTTGGATGTTTTCTCATCCGCTGATCAGTCTCACTCAAGGATTGAAGAAGTGAAAGCTCAGCTTCAGGCTCTGCAAGGGAACATGACATTAGGGCATGTTATTGATGATGTATGGTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_307226.p1 GENE.R_Transcript_307226~~R_Transcript_307226.p1 ORF type:complete len:705 (+),score=107.93,PPR_2|PF13041.2|6.7e+02,PPR_2|PF13041.2|0.00074,PPR_2|PF13041.2|36,PPR_2|PF13041.2|7.6e-09,PPR_2|PF13041.2|10,PPR_2|PF13041.2|5.7e-08,PPR_2|PF13041.2|2.5e+02,PPR_2|PF13041.2|0.00032,PPR_2|PF13041.2|7,PPR_2|PF13041.2|4.7e-10,PPR_2|PF13041.2|1.7e-06,PPR_2|PF13041.2|34,PPR_2|PF13041.2|3.8e+03,PPR|PF01535.16|15,PPR|PF01535.16|6.2,PPR|PF01535.16|4.4e+03,PPR|PF01535.16|7,PPR|PF01535.16|0.027,PPR|PF01535.16|7.6,PPR|PF01535.16|0.5,PPR|PF01535.16|0.00029,PPR|PF01535.16|50,PPR|PF01535.16|0.0013,PPR|PF01535.16|0.059,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|0.00018,PPR|PF01535.16|0.074,PPR|PF01535.16|68,PPR_3|PF13812.2|1.7e+02,PPR_3|PF13812.2|0.0062,PPR_3|PF13812.2|8.4e+02,PPR_3|PF13812.2|2.4e+03,PPR_3|PF13812.2|40,PPR_3|PF13812.2|2.2,PPR_3|PF13812.2|52,PPR_3|PF13812.2|5.4,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.014,PPR_3|PF13812.2|10,PPR_3|PF13812.2|4.1e+02,PPR_1|PF12854.3|0.43,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|4.4e+02,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|5.6,PPR_1|PF12854.3|75,PPR_1|PF12854.3|0.52,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|1.9e+03,PPR_1|PF12854.3|6.9,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|4.1,PPR_1|PF12854.3|3.3 R_Transcript_307226:183-2297(+)
MPSTTEVYSLTNFLIQKCNAINSLKKARQLHAHILTSSSPTTYQTPFLHNNILTMYVNCGSLFHSHLVFDKMPQRNIISYNSLIAAYARRPNTAPCAFQLLAQMRYECFRPNGPTFTSLLQTATGTGDYITGFALHCQIVKFGLVFDVCVQTALIGLYSNLGDLNSANEVFRSVHVKDDIAWNCIISGNLKNNMMREGLCHFKMMLMSNVRPTEFTYSIVLNACARLGFYSFGQLTHTQVMKTGAYVDLPLQNSLVDMYSSCGDTQSACHVFNEIQNPDLVSWNSMMAGYAENREGEKAIDFFVQLQHQSAQKPDEYTFAAVISAIKENPASQYGQPLHAQVITSGLDQSVFIGSPLISMYFENEGTEMAEGVFSSIIKKDVVLWTEMITGYSKTLDGENALKFFYMMLKEGHKVDSFALSSSLSVCADLATLKQGEMLQCQTIKTGYDTDMSVCGSLIDAYSKNGNLQAAKLIFADVTDPDLKCWNSMIGGYSHHGMAEESIKLFDEILVSRLEPDQVTYISLLSACSHCGLVERGKYLWNSMKQKGITPGFKHYSCMVSLLSRAGLLEDAMAIINESPFSENCLELWRTVLSSSVSSRNLAAGLNAAGKILQVNDRDSATHSLLLNLYAAVGRWDGVVETRKRIRGLMLEKDPGLSWVEAGKSLDVFSSADQSHSRIEEVKAQLQALQGNMTLGHVIDDVWY*

Click here to download the sequence:
Link to NCBI Protein BLAST