Transcript Information: R_Transcript_307531.p1


Annotated TAIR IDAT1G47530.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:17451724-17454110 | Forward length=484
E-Value5E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66942399589433
Replicate 20.2566784891968
Replicate 30.72808701405863
Condition 2: 8 Hour
Replicate 10.89801460686718
Replicate 20.60139291015413
Replicate 30.44380466064516
Condition 3: 24 Hour
Replicate 11.010368044251
Replicate 20.37747386854289
Replicate 30.58866687421973


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_307531.p1 GENE.R_Transcript_307531~~R_Transcript_307531.p1 ORF type:5prime_partial len:409 (+),score=50.04,MatE|PF01554.14|2.1e-24,MatE|PF01554.14|1.8e-29,MatE|PF01554.14|8.6e+03 R_Transcript_307531:1-1227(+)
TCTGTTGTCTCCAATGTTGTTGAAGGTTTTGTTTTTGGAATCATGCTAGGGATGGGAAGTGCACTAGAGACACTATGTGGACAAGCAGTTGGTGCTGGACAAACAAACATGTTAGGAATTTACATGCAAAGATCTTGGATTGTGACTGGTACCACAGCCTTGCTTCTAACCCCAATCTACATCTTCACATCACCAATTCTAAGGCTTCTTTATCAGGACAAACACATATCCGATCTTGCAGGCAAGTATGCACTGTGGGTGATTCCGCAATTGTATGCATTCGCCTTGAACTTCCCCATTCAGAAGTTCCTCCAATCTCAGAGTAAAGTTTGGGTAATGTCAATAATTTCCATGCTAGTCTTGGGTATACATGTACTTTTGAATTGGGTCCTTGTGATCAAGTTTCCATTTGGCTTGCTTGGTGCTGCAATGGCTGGGAATATCTCTTGGTTTCTCGTCGTTCTTGGCCAGGCAATCTATATTTTTTCGGGATCTTTCCCAGTCGCTTGGACCGGATTCTCCTTGTTGGCTTTCAAGTCATTGAAGGGCTTCATCAAACTCTCCCTTGCTTCAGCTATAATGTTCTGCTTGGAGCTCTGGCATTTCACAATTATTATCCTTATGGTGGGACGGTTACAGAATCCAGCAGTTGCAGTTGATGCTATTTCGATTTGTATAAATTTGGACTTCTGGACTTTGATGATTGCACTAGGCTTCAATGCAGCAGTCAGTGTGAGGGTGTCGAACGAACTAGGAGCAGGACGATCTAAAGCAGCTAAGTTTTCCGTTGTGGTTGCCACTTCAACATCAGCAGTTGTGGGGGCAATTTTTGCAGTCATGATTTTGGCATTCAGGGAGCAGTTCCCTAAGATTTTCTCTGACAAACCTCCTGTCGTTTCTGAGGCATCAAAGCTGGGATATTTTCTGTCAGCAACCATTTTTCTCAACAGCATCCAACTAGCTCTCCATGGGGTTGCGGTAGGAGCTGGGTGGCAAACCCTGGTTGCCCTGGTAAGCGTTGGATGCTACTACATAGTCGGGCTCCCAGCTGCTGCGCTGCTTGGTTACAAGTTTAACCTCGGGGTTCGTGGGATTTGGGGCGGAATGCTAGTCGGATTCGTGCTTCAGACTCTGATTCTGCTTTTGATTTTGTGGAGGACTAACTGGCATAAAGAAGCTTCACAAGCAGAAGAGCGAATGAGGACATGGGGTGGCCCTGCCGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_307531.p1 GENE.R_Transcript_307531~~R_Transcript_307531.p1 ORF type:5prime_partial len:409 (+),score=50.04,MatE|PF01554.14|2.1e-24,MatE|PF01554.14|1.8e-29,MatE|PF01554.14|8.6e+03 R_Transcript_307531:1-1227(+)
SVVSNVVEGFVFGIMLGMGSALETLCGQAVGAGQTNMLGIYMQRSWIVTGTTALLLTPIYIFTSPILRLLYQDKHISDLAGKYALWVIPQLYAFALNFPIQKFLQSQSKVWVMSIISMLVLGIHVLLNWVLVIKFPFGLLGAAMAGNISWFLVVLGQAIYIFSGSFPVAWTGFSLLAFKSLKGFIKLSLASAIMFCLELWHFTIIILMVGRLQNPAVAVDAISICINLDFWTLMIALGFNAAVSVRVSNELGAGRSKAAKFSVVVATSTSAVVGAIFAVMILAFREQFPKIFSDKPPVVSEASKLGYFLSATIFLNSIQLALHGVAVGAGWQTLVALVSVGCYYIVGLPAAALLGYKFNLGVRGIWGGMLVGFVLQTLILLLILWRTNWHKEASQAEERMRTWGGPAD*

Click here to download the sequence:
Link to NCBI Protein BLAST