Transcript Information: R_Transcript_3076.p1


Annotated TAIR IDAT1G77360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29071983-29073536 | Reverse length=517
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.567654175296
Replicate 24.2188827939291
Replicate 34.7097965150968
Condition 2: 8 Hour
Replicate 15.6065765533412
Replicate 23.6571535721565
Replicate 38.482061037564
Condition 3: 24 Hour
Replicate 16.4367683815993
Replicate 24.0194163398716
Replicate 39.3073884416246


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3076.p1 GENE.R_Transcript_3076~~R_Transcript_3076.p1 ORF type:5prime_partial len:214 (+),score=30.65,PPR_2|PF13041.2|0.0055,PPR_2|PF13041.2|0.005,PPR|PF01535.16|0.01,PPR|PF01535.16|9.5e+02,PPR|PF01535.16|0.01,PPR|PF01535.16|9.5e+02,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|3e+02 R_Transcript_3076:3-644(+)
AGCCCTTATGCTTGGAATTTAATTATTGATATGTTGGGTAAGAATATTATGTTTGACTCTATGTGGGATGTTATTAAGTCTATGAAGAAAGAAAGGCTTCTTTCTCTGGCTACTTTTGCTTCTGTTTTTAGTAGTTATGTCACCAGTGGTCGTGTCGACTATGATCAAAGATTTGATCAAACATGTTTTTGGAGATGGGTATATTATTTCGATGCATGTCTGGTCTTGAAACTTGAGATTTATGAAGTGTTAGCCAGTGCTAGTGGTTCATCTATCGAAATTTTTTTAGATGAAACTGGTTTAAGGGTATCTCAAGAAGACGTTGAGCATGTCCAGAAATTGTCATATAGGTACCCTTCAACTGCAATCAAAATTTTCAGGTGGGCTGGGTACCATTTGAATGATAGACATAGCCCTTATGCTTGGAATTTAATTATTGATATGTTGGGTAAGAATATTATGTTTGACTCTATGTGGGATGTTATTAAGTCTATGAAGAAAGAAAGGCTTCTTTCTCTGGCTACTTTTGCTTCTGTTTTTAGTAGTTATGTCACCAGTGGTCGTGTCGACTATGATCAAAGATTTGATCAAACATGTTTTTGGAGATGGGTATATTATCAGCTCTTCAAGAAGCGTCTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3076.p1 GENE.R_Transcript_3076~~R_Transcript_3076.p1 ORF type:5prime_partial len:214 (+),score=30.65,PPR_2|PF13041.2|0.0055,PPR_2|PF13041.2|0.005,PPR|PF01535.16|0.01,PPR|PF01535.16|9.5e+02,PPR|PF01535.16|0.01,PPR|PF01535.16|9.5e+02,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|3.3,PPR_3|PF13812.2|3e+02 R_Transcript_3076:3-644(+)
SPYAWNLIIDMLGKNIMFDSMWDVIKSMKKERLLSLATFASVFSSYVTSGRVDYDQRFDQTCFWRWVYYFDACLVLKLEIYEVLASASGSSIEIFLDETGLRVSQEDVEHVQKLSYRYPSTAIKIFRWAGYHLNDRHSPYAWNLIIDMLGKNIMFDSMWDVIKSMKKERLLSLATFASVFSSYVTSGRVDYDQRFDQTCFWRWVYYQLFKKRL*

Click here to download the sequence:
Link to NCBI Protein BLAST