Transcript Information: R_Transcript_30771.p1


Annotated TAIR IDAT1G03000.1
Annotated Gene Nameperoxin 6
Annotated Gene Symbol(s)PEX6
Annotation TypeOrtholog
Chromosome Positionchr1:688057-692453 | Reverse length=941
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9798440128903
Replicate 24.8683965214501
Replicate 37.7447703210689
Condition 2: 8 Hour
Replicate 15.3023527771358
Replicate 26.4181897828122
Replicate 37.7686668538735
Condition 3: 24 Hour
Replicate 18.2779427491109
Replicate 26.1727690868419
Replicate 36.9530910700971


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30771.p1 GENE.R_Transcript_30771~~R_Transcript_30771.p1 ORF type:5prime_partial len:979 (+),score=209.79,AAA|PF00004.25|1.1e-10,AAA|PF00004.25|8.6e-47,AAA_16|PF13191.2|0.0089,AAA_16|PF13191.2|0.00039,AAA_16|PF13191.2|1.3e+02,AAA_17|PF13207.2|0.0018,AAA_17|PF13207.2|0.0031,AAA_5|PF07728.10|0.011,AAA_5|PF07728.10|0.019,AAA_5|PF07728.10|6.9e+03,AAA_22|PF13401.2|0.19,AAA_22|PF13401.2|0.0072,AAA_22|PF13401.2|1.2e+03,AAA_19|PF13245.2|3.5e+03,AAA_19|PF13245.2|1.5,AAA_19|PF13245.2|0.0035,AAA_33|PF13671.2|0.16,AAA_33|PF13671.2|0.088,AAA_18|PF13238.2|0.41,AAA_18|PF13238.2|0.1,RuvB_N|PF05496.8|1.6e+02,RuvB_N|PF05496.8|1.1e+03,RuvB_N|PF05496.8|0.00026,TsaE|PF02367.13|0.58,TsaE|PF02367.13|0.087 R_Transcript_30771:3-2939(+)
TTTACCAGCCGCTTTGGTTATATCTTCTTCTCTCAGTCAGCTCAGCGTCTCGAGAATCGGATCACTTTCCCGCGATCAATCCAACTAAAAATTCCCCTCTCTCTCTCATTTCTGTCTCTAATGGTGGAACGAAGGAAGCCATTGGTGCTAGCTTCAACTAGAGCCTTTCTAAACTCAGTACTCCAACAAAACCAACCACCTTCTACTCAAATTGACCCAGATGTCCATCCTCTCACACCCTCTTCCTTGCCTTCTCTTCAGTTACAAGCTGGAATTCTTCGGATTTCTAAGGACAATCATGGAAACTTCCCTAATTCTCTCGACGATTCTGCTCTTGTTGGTCTCTCCACTTCTGCCCTTAAACGCCTCGCCATCACCTCCGGCTCTCTGGTGCTCATCAAGAACACCGACACCAATGCGTGGAGTATAGGCCAGGCTGTAGTTTTAGATCCCCCTCCTTCCGAAGGTCAGTTTCTGTCTGATGTTGAGGAGGGATCTTCTTGTGCATCTAATATGATGCTTGTTTTTCCTTCATTAACTTTCCCGCAAGCTCTAAACCGGCCTTTGGACAAAAAGGTTGCCTATCTCTCGCCTCTCCTCGCTTTTAATGCTCACTTGCACACGTCATGGTTCATGTCTCTCCTTCGCCATGGAAAGGAGTCTTTAGCATCTTTCTTCGATGTTAAAGAGGATTTGGAGAGAAGTGGAGGGGTGATGAAAGATTGTGTTGTCAATATAAGAGTGGAGCCTTGGCCTCTTTTGCCATGCTATGCCTCACATGTGAGAATATCTTTTGTTAAGATACCGGAGTGTGGTACAATTGAATCTCTTAGAGGAAAATCATCCATTGAAGCTATGGATCGTCAAGAAATGATTGACTTCGCATTACAAGACTATTTCAATGTTGATAGATATCTCGCTAAAGATGATGTCTTCAGAGTTCAAATTATGTGGAATTGCCATTCAATTATGTGCGTCAATTGTAGCCTGAGAAAGAAGAAGAATCAATGCGATATTATTTGCTTTAAGGTTGTGGCCTTGGATCCTCCTGAGGAACCCGTTCTTCGTGTCAATCGTAAAAAAACTGCCCTTGTGCTTGGAGGAAGTGCTGCTGCTGCTGTTCCACCAGATTTATTAATCTCTGAGTCAATGGAAATTGCTCCTTTGCAGAGGAATGCCATAAAGACCTTAGGATCTATACTTACTCCTCCTTTGTGCCCATCATTACTCTCTTCCAAATTTAGAGTTGCCATTCTGTTACATGGTTTGGCAGGATCTGGTAAGAGGACTGTTGTTCGATATGTTGCTCATCGACTTGGTCTACATGTTGTAGAATATAGCTGCCATTCTCTTATGACAGGTTCTGAGAAAAAAGCATCTTCAATTCTAGCTCAGGCCTTCAGTACAGCTCATAGATACTCTCCAGCCATATTGTTACTACGTCATTTCAATGTCCTACGAAATCTGGCTACCCAGGAGGGCTCACAGTCTGATCATGCTGGTATGATTTCTGAGATTGCATCTGTTATGAGGAAATTCACACAGCCATCAGTCATGGATGAAGATATCTCTTTGGAGGAGAAATTTACTGGTAGACCTCACTTGAAGAGTGCTGAAACGATAAGGCAGCATCAGCTGTTCTTAGTTGCTGCAACTGAGAGTACTGAAGGTCTGCCACCGGCCATTAGACGTTGCTTCAGCCATGAACTCAGTCTGGCTCCTTTAACTGAAGAAGAAAGAGCTGAAATGCTTTCTGGATCACTGCAAAGCATTGCTGAGATATCTGCCAATGGTGATGTGGAGCAGGTTGTCAAAGACATAGTTGCTCAGACATCTGGATTCACGCCAAGGGATTTGCGCTCCCTAATTGCTGATGCAGGCGCTAATGTGATCCCAAAGGAAAATGTTCTGTGTGAACCTCAAAAGTCAGTTGAAAATCATTTCCATAGTGATAATAAGGTGCAGTCTAAACCTGTTGATGGCACTACCCAGAGTCCTGGAAAAGAAGACTTGACAAAAGCATTGGAGCGCTCAAAGAAAAGGAATGCTTCTGCATTGGGTGCTCCCAAGGTCCCTAATGTGAAATGGGAAGATGTTGGGGGGCTCGAAGATGTGAAGAAAGCAATCCTAGATACAGTTCAGCTACCTCTCCTGCACAAGGATTTGTTTTCTTCTGGGCTACGTAAACGTTCTGGAGTTCTTCTATATGGTCCTCCAGGCACTGGAAAGACTCTATTAGCAAAAGCTGTGGCGACAGAGTGCTCTTTGAATTTCCTTAGTGTTAAAGGACCTGAACTAATTAATATGTACATTGGAGAGTCAGAGAAAAATGTGCGTGATATATTTGAAAAGGCTCGATCTGCACGCCCCTGTGTCATTTTTTTTGATGAACTTGATTCTCTAGCACCTGCTCGAGGTGCTTCTGGTGATTCTGGGGGAGTTATGGACAGAGTAGTTTCTCAGATGCTTGCAGAGATTGATGGCCTGAATGATTCTACTCAGGACTTGTTTGTAATTGGAGCAAGCAATCGACCTGATCTTATTGACCCAGCACTTCTACGTCCTGGTCGATTTGACAAGCTCCTCTATGTTGGGGTTGTATCTGATCCATCTTACAGAGAGAGAGTTCTTAAAGCACTCACCCGAAAGTTTAAATTGCACAAAGATGTATCTCTTTACTCAATCGCGAAACGATGCCCTCCAAATTTTACTGGTGCAGATATGTATGCCTTGTGTGCAGATGCTTGGTTTCATGCTGCAAAACACCAGGTCCTAAATGTGGAATCAGATTCATCCAATGCTGATACTGAAGTTGACACCATTGTCGAACATGATGATTTTATCAAGGTGTTGGGAGAGTTAGCTCCATCTCTTTCCCTAGCAGAGCTGAGGAAGTACGAAATGCTACGAGACCAGTTTGGAGGAGGTTCAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30771.p1 GENE.R_Transcript_30771~~R_Transcript_30771.p1 ORF type:5prime_partial len:979 (+),score=209.79,AAA|PF00004.25|1.1e-10,AAA|PF00004.25|8.6e-47,AAA_16|PF13191.2|0.0089,AAA_16|PF13191.2|0.00039,AAA_16|PF13191.2|1.3e+02,AAA_17|PF13207.2|0.0018,AAA_17|PF13207.2|0.0031,AAA_5|PF07728.10|0.011,AAA_5|PF07728.10|0.019,AAA_5|PF07728.10|6.9e+03,AAA_22|PF13401.2|0.19,AAA_22|PF13401.2|0.0072,AAA_22|PF13401.2|1.2e+03,AAA_19|PF13245.2|3.5e+03,AAA_19|PF13245.2|1.5,AAA_19|PF13245.2|0.0035,AAA_33|PF13671.2|0.16,AAA_33|PF13671.2|0.088,AAA_18|PF13238.2|0.41,AAA_18|PF13238.2|0.1,RuvB_N|PF05496.8|1.6e+02,RuvB_N|PF05496.8|1.1e+03,RuvB_N|PF05496.8|0.00026,TsaE|PF02367.13|0.58,TsaE|PF02367.13|0.087 R_Transcript_30771:3-2939(+)
FTSRFGYIFFSQSAQRLENRITFPRSIQLKIPLSLSFLSLMVERRKPLVLASTRAFLNSVLQQNQPPSTQIDPDVHPLTPSSLPSLQLQAGILRISKDNHGNFPNSLDDSALVGLSTSALKRLAITSGSLVLIKNTDTNAWSIGQAVVLDPPPSEGQFLSDVEEGSSCASNMMLVFPSLTFPQALNRPLDKKVAYLSPLLAFNAHLHTSWFMSLLRHGKESLASFFDVKEDLERSGGVMKDCVVNIRVEPWPLLPCYASHVRISFVKIPECGTIESLRGKSSIEAMDRQEMIDFALQDYFNVDRYLAKDDVFRVQIMWNCHSIMCVNCSLRKKKNQCDIICFKVVALDPPEEPVLRVNRKKTALVLGGSAAAAVPPDLLISESMEIAPLQRNAIKTLGSILTPPLCPSLLSSKFRVAILLHGLAGSGKRTVVRYVAHRLGLHVVEYSCHSLMTGSEKKASSILAQAFSTAHRYSPAILLLRHFNVLRNLATQEGSQSDHAGMISEIASVMRKFTQPSVMDEDISLEEKFTGRPHLKSAETIRQHQLFLVAATESTEGLPPAIRRCFSHELSLAPLTEEERAEMLSGSLQSIAEISANGDVEQVVKDIVAQTSGFTPRDLRSLIADAGANVIPKENVLCEPQKSVENHFHSDNKVQSKPVDGTTQSPGKEDLTKALERSKKRNASALGAPKVPNVKWEDVGGLEDVKKAILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSTQDLFVIGASNRPDLIDPALLRPGRFDKLLYVGVVSDPSYRERVLKALTRKFKLHKDVSLYSIAKRCPPNFTGADMYALCADAWFHAAKHQVLNVESDSSNADTEVDTIVEHDDFIKVLGELAPSLSLAELRKYEMLRDQFGGGSK*

Click here to download the sequence:
Link to NCBI Protein BLAST