Transcript Information: R_Transcript_307838.p1


Annotated TAIR IDAT3G47110.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17347103-17350296 | Reverse length=1025
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.050214473052871
Replicate 20.11552297340467
Replicate 30.12603431964871
Condition 2: 8 Hour
Replicate 10.20208416737754
Replicate 20.030757746686638
Replicate 30.22471044784523
Condition 3: 24 Hour
Replicate 10.44210357797505
Replicate 20.151686787418
Replicate 30.18064130415596


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_307838.p1 GENE.R_Transcript_307838~~R_Transcript_307838.p1 ORF type:internal len:727 (+),score=103.76,Pkinase|PF00069.21|1.2e-37,Pkinase_Tyr|PF07714.13|3.7e-37,LRR_8|PF13855.2|0.0059,LRR_8|PF13855.2|3.5e-07,LRR_8|PF13855.2|0.00068,LRR_8|PF13855.2|18,LRR_8|PF13855.2|6.7e-07,LRR_8|PF13855.2|7.3e-05,LRR_8|PF13855.2|0.0014,LRR_8|PF13855.2|0.00074,LRR_4|PF12799.3|2,LRR_4|PF12799.3|3.6,LRR_4|PF12799.3|34,LRR_4|PF12799.3|8.3,LRR_4|PF12799.3|3.9e+03,LRR_4|PF12799.3|5e+02,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|10,LRR_4|PF12799.3|0.02,LRR_4|PF12799.3|0.035,LRR_4|PF12799.3|5.4e+03,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|7.7e+03,LRR_1|PF00560.29|6.5e+03,LRR_1|PF00560.29|16,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|7.4e+03,LRR_1|PF00560.29|1.4,LRR_1|PF00560.29|1.8e+03,LRR_1|PF00560.29|12,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|25,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|16 R_Transcript_307838:3-2180(+)
ACTCTTCAACAGCTTTTGCTGTTTAGGAACCAATTAGAAGGAGAACCTCCTAGCACCATTTCTTTGCTCAGCAATCTAAAACAGCTAGTACTTGCAGCTAACAACTTTTACGGGACTTTGCCATCTTCAATCTATAACTTATCCTCTGTGCAAGTAATATCTCTGGCTTTTAATAGCTTTTCTGGTCATCTTAGGCCTGATATAGGCCTTGCTCTTCCAGACCTTCAGGTGCTTCTTTTGTCGACAAACAATTTGACTGGTCTCATTCCTGCATCATTGGCTAATGCTTCAAGCTTAGCATACATTGATCTCAGTGCAAACAGTTTCACTGGAACTGTACCCCTGACATTTGGGTATCTGCAAGATTTATCGTATCTGAACATTGAAGAAAATAACTTAGGGGGCAATGCTGGTGAAGATTTAGAGTTTATCACCTCTTTGGACAACTGCACCTATCTAGATCTACTGTCCTTTGAGGGGAACAACTTTCGGAGCAATTTGCCTAGCTCGATAACCAACCTCACAAACCAAATGACATGGCTAAGCTTTGGAAGTAACTACATTCAGGGGCACATCCCAGTAGGAATTTCAAAGCTTTCCAACCTGTTTGTGTTTAGTGCAGAAGCAAACCTCTTGACGGGCATTATTCCTGATGCTATCGGACAGCTTTCCAACCTGCAAGTTCTGTCATTGGCTGGCAATAATCTAACAGGACAGCTTCCCTCATCCCTGGTTAACATTTCTGGACTCTCGTCACTCCTACTGAATTACAACCACCTTGGAGGAACTTTGCCATCGTTTATCAGAAATATCATGAGTTTGCAGGTGCTCAACTTGTCTTCAAATGAATTTGATTCCATACCAAAGGAGCTGTTTTGCCAATCTGCATTATACAGTGTGAACATGTCCGATAACCACTTCAATGGCCACTTGCCACAAGAGATAGGAATGTGGACAGGACTTACCACATTAGATGTTTCATCCAACAGACTTTCGGGTAACATTCCCACCACAGTAGGGCGTTGTTTGAGCCTGGAAGAACTATACATGCAAAATAATCTCTTCAATGGAAGCATACCTTATTTAAGGGAGTTAAAAGGCATCAAACATATAGACCTTTCTCAAAACAACTTATCAGGCCAAATACCATCATATATAGTAAACCTGTCTACACTGCAGATCTTGAATTTGTCCTTTAACAATTTAGATGGAGGGGTGCCTGTAGAGGGGATTTTCCAGAATGCAAGTGCATTTGACGTAAAGGGCAACATTAGGCTTTGTGGAGGAATACAAGAATTGCATCTGGAGCCATGCCCTGCTAGAAAGCAAGAAAGAACCAGAAAGCACATTGATATCAAGTATATATTGCTTGCTGTGATATTGTCCTTACTGTTAGGTTTCATAGTGCTTTTAGCAGTTTACTGCAGAATAAAAAGGAGAAAGAAGCAGGACCCCCTCGAGGAATCTCCTTCCAAGCACTTCTTTCCAAAGATCTCATACAAAGACCTCTTCAACGCTACTGGCGGATTCTCTCCAGCTAACTTAATTGGTTCAGGAAATTTTGGCACTGTTTATAAAGGTAAACTTGGAGCAGAGGAAACAACATTTGCAGTTAAGGTACTCAATCTTTATCAACACGGTGCTTTAAAGAGCTTCACAGCTGAGTGTAATGCTCTACGGAGTATAAGGCACAGAAACCTCGTAAAGGTCCTGACAGCATGCTCAAGTTCAGATTTTCATGGAAATGAATTTAAAGCCATTATCTACGAGTTTGTGCCAAATGGAAGCTTGGAGTCGTGGTTGCATCCAGAAGACAGACAACCGCTAAATAGACATCTGAACCTTCTTCAGAGAATTAACATTGCCAAAGATGTGGCTTCTGCATTATCTTATCTCCACAAAGGGTGTGAAACACAAGTTATCCACTGTGACCTAAAGCCCAGCAATATTCTCCTGGATAATGATTTCAAAGCTCATGTCAGCGACTTTGGTTTGGCGAAACTTCATTCAAAATATGGTGAAAACATCATAGTAGGCCAACTTAGCTCAGATGGAATCAAAGGAACAATTGGTTATACAGCCCCAGAGTATGGCATGGGAGGTGATGTATCAGTCCATGGTGATGTTTACAGCTTTGGCATCTTGTTGTTGGAAATGTTCACTGGAAGAAGAGCTACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_307838.p1 GENE.R_Transcript_307838~~R_Transcript_307838.p1 ORF type:internal len:727 (+),score=103.76,Pkinase|PF00069.21|1.2e-37,Pkinase_Tyr|PF07714.13|3.7e-37,LRR_8|PF13855.2|0.0059,LRR_8|PF13855.2|3.5e-07,LRR_8|PF13855.2|0.00068,LRR_8|PF13855.2|18,LRR_8|PF13855.2|6.7e-07,LRR_8|PF13855.2|7.3e-05,LRR_8|PF13855.2|0.0014,LRR_8|PF13855.2|0.00074,LRR_4|PF12799.3|2,LRR_4|PF12799.3|3.6,LRR_4|PF12799.3|34,LRR_4|PF12799.3|8.3,LRR_4|PF12799.3|3.9e+03,LRR_4|PF12799.3|5e+02,LRR_4|PF12799.3|0.32,LRR_4|PF12799.3|10,LRR_4|PF12799.3|0.02,LRR_4|PF12799.3|0.035,LRR_4|PF12799.3|5.4e+03,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|7.7e+03,LRR_1|PF00560.29|6.5e+03,LRR_1|PF00560.29|16,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|7.4e+03,LRR_1|PF00560.29|1.4,LRR_1|PF00560.29|1.8e+03,LRR_1|PF00560.29|12,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|25,LRR_1|PF00560.29|2.7e+02,LRR_1|PF00560.29|2.8,LRR_1|PF00560.29|16 R_Transcript_307838:3-2180(+)
TLQQLLLFRNQLEGEPPSTISLLSNLKQLVLAANNFYGTLPSSIYNLSSVQVISLAFNSFSGHLRPDIGLALPDLQVLLLSTNNLTGLIPASLANASSLAYIDLSANSFTGTVPLTFGYLQDLSYLNIEENNLGGNAGEDLEFITSLDNCTYLDLLSFEGNNFRSNLPSSITNLTNQMTWLSFGSNYIQGHIPVGISKLSNLFVFSAEANLLTGIIPDAIGQLSNLQVLSLAGNNLTGQLPSSLVNISGLSSLLLNYNHLGGTLPSFIRNIMSLQVLNLSSNEFDSIPKELFCQSALYSVNMSDNHFNGHLPQEIGMWTGLTTLDVSSNRLSGNIPTTVGRCLSLEELYMQNNLFNGSIPYLRELKGIKHIDLSQNNLSGQIPSYIVNLSTLQILNLSFNNLDGGVPVEGIFQNASAFDVKGNIRLCGGIQELHLEPCPARKQERTRKHIDIKYILLAVILSLLLGFIVLLAVYCRIKRRKKQDPLEESPSKHFFPKISYKDLFNATGGFSPANLIGSGNFGTVYKGKLGAEETTFAVKVLNLYQHGALKSFTAECNALRSIRHRNLVKVLTACSSSDFHGNEFKAIIYEFVPNGSLESWLHPEDRQPLNRHLNLLQRINIAKDVASALSYLHKGCETQVIHCDLKPSNILLDNDFKAHVSDFGLAKLHSKYGENIIVGQLSSDGIKGTIGYTAPEYGMGGDVSVHGDVYSFGILLLEMFTGRRAT

Click here to download the sequence:
Link to NCBI Protein BLAST