Transcript Information: R_Transcript_30789.p1


Annotated TAIR IDAT5G61590.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24764653-24765258 | Reverse length=201
E-Value3.4E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.096636845731
Replicate 226.338554368374
Replicate 311.521140211083
Condition 2: 8 Hour
Replicate 110.721621337847
Replicate 217.597617070282
Replicate 312.566499660268
Condition 3: 24 Hour
Replicate 14.3470404218138
Replicate 27.5692604476538
Replicate 39.8429914568296


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30789.p1 GENE.R_Transcript_30789~~R_Transcript_30789.p1 ORF type:5prime_partial len:169 (-),score=20.39,AP2|PF00847.16|4.7e-10,AP2|PF00847.16|1.7e+03 R_Transcript_30789:193-699(-)
AGAAGGCCGTGGGGTAAGTACGCTGCCGAGATTCGGGACCCAAACAAGAGAGGATCCCGAGTCTGGCTCGGTACTTACGACACAGCTGTCGAGGCGGCCCGAGCCTACGACCGAGCCGCCTTCAAGCTCCGGGGCTGTAAGGCCATTCTTAACTTTCCTCTCGAGGTAGGGAAAATCGTGGAATCTACCACCGCTACAAACGGCAGCGCTGCCACGACTGGTGGTGGAAAGAAGAGGAAGGAGGAGAAGAAAGAGGTCGAGGAGGAAGTCAGAGAAAAGAAGGTGAAAGTAAAGGAGGAAATTATTAGTGAAGCTACCACTACGACGTCGTTTGCAGTAGGTAATAATACGAATAATAATGAGGTGGGGCCGTTGACGCCGTCAAATTGGATGGCGGTATGGGATTTGGATGGGAAAGATGTGAAAGAAGGGATCTTTAACATCCCGCCCTTGTCGCCGTTATCTCCACACCCACCTTTTGGATATTCACAGCTAGCTGTTATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30789.p1 GENE.R_Transcript_30789~~R_Transcript_30789.p1 ORF type:5prime_partial len:169 (-),score=20.39,AP2|PF00847.16|4.7e-10,AP2|PF00847.16|1.7e+03 R_Transcript_30789:193-699(-)
RRPWGKYAAEIRDPNKRGSRVWLGTYDTAVEAARAYDRAAFKLRGCKAILNFPLEVGKIVESTTATNGSAATTGGGKKRKEEKKEVEEEVREKKVKVKEEIISEATTTTSFAVGNNTNNNEVGPLTPSNWMAVWDLDGKDVKEGIFNIPPLSPLSPHPPFGYSQLAVM*

Click here to download the sequence:
Link to NCBI Protein BLAST