Transcript Information: R_Transcript_308399.p1


Annotated TAIR IDAT2G19070.1
Annotated Gene Namespermidine hydroxycinnamoyl transferase
Annotated Gene Symbol(s)SHT
Annotation TypeHomolog
Chromosome Positionchr2:8260185-8261958 | Reverse length=451
E-Value2E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13724030793022
Replicate 20.63146768169318
Replicate 31.8945422072006
Condition 2: 8 Hour
Replicate 11.8410424772365
Replicate 21.8493962425041
Replicate 30.81886965204753
Condition 3: 24 Hour
Replicate 10.51784527581287
Replicate 20.82914507107433
Replicate 31.4811228735494


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_308399.p1 GENE.R_Transcript_308399~~R_Transcript_308399.p1 ORF type:complete len:133 (+),score=15.95,Transferase|PF02458.11|5.9e-25 R_Transcript_308399:196-594(+)
ATGCTTAAGAAGGTTGTTAATGCTAATAATAGAGATGGTGTAAGACCATATAGTCGTTATGAAGTTATTGCAACTCATATATGGAAATGTGTATCCAAGGCACGAAACCATGAGAGTGAGCAACCTACCGATTTGCATATCATTGTTAACTCTCGTGCTCGCATGAATCCACCTTTGTTATCCAGTTACTTTGGAAATGCAATTGTTATTGTACCAACATCTACCCAAGCTGGTGACCTCATTTTAAGGCCTCTAAGCGACAGTTGCAGTAAAATAAGAGAAGCAATAGAGATGGTGAATAATGAGTATGTATTGTCAATGATTGAGTACCTCAAGAGGCAAGAAAGCTTGTGCCCATTTCAAGACCTTCAAGGCTATCTATGGAAAACCCTAATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_308399.p1 GENE.R_Transcript_308399~~R_Transcript_308399.p1 ORF type:complete len:133 (+),score=15.95,Transferase|PF02458.11|5.9e-25 R_Transcript_308399:196-594(+)
MLKKVVNANNRDGVRPYSRYEVIATHIWKCVSKARNHESEQPTDLHIIVNSRARMNPPLLSSYFGNAIVIVPTSTQAGDLILRPLSDSCSKIREAIEMVNNEYVLSMIEYLKRQESLCPFQDLQGYLWKTLI*

Click here to download the sequence:
Link to NCBI Protein BLAST