Transcript Information: R_Transcript_308399.p3


Annotated TAIR IDAT2G19070.1
Annotated Gene Namespermidine hydroxycinnamoyl transferase
Annotated Gene Symbol(s)SHT
Annotation TypeHomolog
Chromosome Positionchr2:8260185-8261958 | Reverse length=451
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.352071181831
Replicate 21.8144950977048
Replicate 30
Condition 2: 8 Hour
Replicate 11.81376777387
Replicate 21.6563616178656
Replicate 30.44818791655277
Condition 3: 24 Hour
Replicate 13.117726907466
Replicate 20.27228714679725
Replicate 31.3510928819072


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_308399.p3 GENE.R_Transcript_308399~~R_Transcript_308399.p3 ORF type:complete len:81 (+),score=16.77,Transferase|PF02458.11|1.9e-07 R_Transcript_308399:576-818(+)
ATGGAAAACCCTAATCTAGAAATTATAAGTTGGTTAACATTTCAAGACCTTCAAGACAAAGACTTTGGGTGGGGCAAAGAGATCTACTTTGGACTAGGAAAAAATATTTGGGATGGTGAATTCCTAATTCTTCCTGGTTATGATGACAATGATGGTTCAATATTGGTTGATGGGTGCTTGCAGGCTGATCATATGTATGAATTCAAGAAGTATTTTTATGGGGATATCAAAATAGTTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_308399.p3 GENE.R_Transcript_308399~~R_Transcript_308399.p3 ORF type:complete len:81 (+),score=16.77,Transferase|PF02458.11|1.9e-07 R_Transcript_308399:576-818(+)
MENPNLEIISWLTFQDLQDKDFGWGKEIYFGLGKNIWDGEFLILPGYDDNDGSILVDGCLQADHMYEFKKYFYGDIKIVE*

Click here to download the sequence:
Link to NCBI Protein BLAST