Transcript Information: R_Transcript_308403.p2


Annotated TAIR IDAT2G19070.1
Annotated Gene Namespermidine hydroxycinnamoyl transferase
Annotated Gene Symbol(s)SHT
Annotation TypeHomolog
Chromosome Positionchr2:8260185-8261958 | Reverse length=451
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20980414890481
Replicate 20.24133678639423
Replicate 30
Condition 2: 8 Hour
Replicate 10.28144672353155
Replicate 20.51404326071691
Replicate 30.62591760759955
Condition 3: 24 Hour
Replicate 10.26388284169775
Replicate 20
Replicate 30.75474843747922


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_308403.p2 GENE.R_Transcript_308403~~R_Transcript_308403.p2 ORF type:complete len:87 (+),score=0.57,Transferase|PF02458.11|4.2e-12 R_Transcript_308403:196-456(+)
ATGCTTAAGAAGGTTGTTAATGCTAATAATAGAGATGGTGTAAGACCATATAGTCGTTATGAAGTTATTGCAACTCATATATGGAAATGTGTATCCAAGGCACGAAACCATGAGAGTGAGCAACCTACCGATTTGCATATCATTGTTAACTCTCGTGCTCGCATGAATCCACCTTTGTTATCCAGGTACATAATACTACCAATATTAGTAGATATATGTAAATTATTACATGCGACTGTTGTCCGACAAGTCACTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_308403.p2 GENE.R_Transcript_308403~~R_Transcript_308403.p2 ORF type:complete len:87 (+),score=0.57,Transferase|PF02458.11|4.2e-12 R_Transcript_308403:196-456(+)
MLKKVVNANNRDGVRPYSRYEVIATHIWKCVSKARNHESEQPTDLHIIVNSRARMNPPLLSRYIILPILVDICKLLHATVVRQVTF*

Click here to download the sequence:
Link to NCBI Protein BLAST