Transcript Information: R_Transcript_308404.p2


Annotated TAIR IDAT2G19070.1
Annotated Gene Namespermidine hydroxycinnamoyl transferase
Annotated Gene Symbol(s)SHT
Annotation TypeHomolog
Chromosome Positionchr2:8260185-8261958 | Reverse length=451
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.63629826655979
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_308404.p2 GENE.R_Transcript_308404~~R_Transcript_308404.p2 ORF type:complete len:108 (+),score=26.11,Transferase|PF02458.11|1.2e-05,Transferase|PF02458.11|30 R_Transcript_308404:576-899(+)
ATGGAAAACCCTAATCTAGAAATTATAAGTTGGTTAACATTTCAAGACCTTCAAGACAAAGACTTTGGGTGGGGCAAAGAGATCTACTTTGGACTAGGAAAAAATATTTGGGATGGTGAATTCCTAATTCTTCCTGGTTATGATGACAATGATGGTTCAATATTGGTTGATGGGTGCTTGCAGGCTGATCATATGTATGAATTCCTAATTCTTCCTGGTTATGATGACAATGATGGTTCAATATTGGTTGATGGGTGCTTGCAGGCTGATCATATGTATGAATTCAAGAAGTATTTTTATGGGGATATCAAAATAGTTGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_308404.p2 GENE.R_Transcript_308404~~R_Transcript_308404.p2 ORF type:complete len:108 (+),score=26.11,Transferase|PF02458.11|1.2e-05,Transferase|PF02458.11|30 R_Transcript_308404:576-899(+)
MENPNLEIISWLTFQDLQDKDFGWGKEIYFGLGKNIWDGEFLILPGYDDNDGSILVDGCLQADHMYEFLILPGYDDNDGSILVDGCLQADHMYEFKKYFYGDIKIVE*

Click here to download the sequence:
Link to NCBI Protein BLAST