Transcript Information: R_Transcript_308664.p1


Annotated TAIR IDAT5G62165.1
Annotated Gene NameAGAMOUS-like 42
Annotated Gene Symbol(s)AGL42
Annotation TypeHomolog
Chromosome Positionchr5:24965075-24968437 | Forward length=210
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.14227787326803
Condition 2: 8 Hour
Replicate 10.60834447073901
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.54379390526453


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_308664.p1 GENE.R_Transcript_308664~~R_Transcript_308664.p1 ORF type:complete len:161 (+),score=43.28,SRF-TF|PF00319.14|1.4e-12 R_Transcript_308664:128-610(+)
ATGGTGAAAAACCCCCTGAAACCTTCAAAGAAAGGCGCAATGAGAGAATCCATGAAAGCTTTTAAGTTGAGAAAATCTTCAATCTTCAAGAAAGCTCACGAATTATCAGTACTTTGTGGGGTTGAAGTTGGGGTTGTGATCTTTGAACCTGATCATCAAGACTCTACTGCTACAAGTAAAGATTTGCACAACATCGTTGCCAAGTATCAGAGCACAAACGCAGAAGCAGCTGATCATCAGAACAACAACAACAACAACAATTATCATCTTGATGTTCCGGTGGAAAATCTTGAAATTGAAAGGCTTTCAGTGGATCAGTTGGTTGATTTGGTGGGTTGCTTGGATTATAAGTTAGGGATTGTTGAAGAAAGGATTGGATTCTTGAAGAGTGGAGTTGAACTGATACAATGTTATCAAGAGCAGCAGAGTGTTGAAGATTACCAGAAGTTGACGGTCTGGGAAAGATTGTTGATGGGTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_308664.p1 GENE.R_Transcript_308664~~R_Transcript_308664.p1 ORF type:complete len:161 (+),score=43.28,SRF-TF|PF00319.14|1.4e-12 R_Transcript_308664:128-610(+)
MVKNPLKPSKKGAMRESMKAFKLRKSSIFKKAHELSVLCGVEVGVVIFEPDHQDSTATSKDLHNIVAKYQSTNAEAADHQNNNNNNNYHLDVPVENLEIERLSVDQLVDLVGCLDYKLGIVEERIGFLKSGVELIQCYQEQQSVEDYQKLTVWERLLMGL*

Click here to download the sequence:
Link to NCBI Protein BLAST