Transcript Information: R_Transcript_30875.p1


Annotated TAIR IDAT5G56140.1
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22725462-22727932 | Forward length=315
E-Value1.1E-147
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.37717001476
Replicate 26.6152727339021
Replicate 312.316293844507
Condition 2: 8 Hour
Replicate 19.9788285230212
Replicate 29.5722953087267
Replicate 39.4487836106124
Condition 3: 24 Hour
Replicate 114.70243134103
Replicate 214.577619746169
Replicate 310.344189201342


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30875.p1 GENE.R_Transcript_30875~~R_Transcript_30875.p1 ORF type:complete len:292 (+),score=51.94,STAR_dimer|PF16544.1|5.9e-09 R_Transcript_30875:364-1239(+)
ATGTCTTCAGGAAGATACATGGCGTACTCACCATCACCATCCACCACAGCCCCTCACTCTCCTCACATCGGTGGCCTTCGTTCTGCCTCTTCTGCTCTCGCTGAGCAAGAGAAATATCTCTCAGAGTTACTGGCTGAACGTCAAAAGCTAGGGCCATTTATGCCCGTCCTCCCACAGTGCTACCGCTTGTTAAACCAGGAAATATTGCGTGTAACTACACTGTTGGGGAATGCTTCGATTTTAGATCAAACTGGGCTTGAACATGCTAGGCCCCTGGCATCTGGAGGAATGTATTCAAATGGAGGAGCAGATATGAATGGATGGGCACCACCATACCAATCAGAAATGTCTAGTCTGCTACAATCTTCAGCCCAGAACTGGCGCGGTTCTCATGGTAACTCGTCAGGCCTTATTGTGAAGAGGACTATCAGAGTTGATATTCCTGTTGATAAATATCCCAATCAGTACAACTTTGTCGGACGTCTCCTTGGTCCTAGGGGAAACTCTTTGAAGCGAGTTGAAGCTAGCACTGAGTGCCGTGTGCTTATCAGAGGACGTGGTAGCATTAAGGATCCAACAAAGGAGGATATGATGCGTGGTAAACCGGGCTATGAGCATCTTAACGAGCCCCTCCATATTCTCGTGGAGGCAGAATTGCCTGTTGAAATTATTGATGCTCGCCTAATGCAGGCTCGTGAGATACTCGAGGATCTGCTGAAGCCTGTGGATGAGTCACAGGACTTCTTCAAGAAACAGCAACTGCGAGAGTTAGCAATGTTAAATGGTACACTGCGTGAAGATGGTTCTCACATGTCTGGTTCGGTGTCTCCCTTTAATAATAGTTTGGGCATGAAGCGGGCGAAGACTCAGGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30875.p1 GENE.R_Transcript_30875~~R_Transcript_30875.p1 ORF type:complete len:292 (+),score=51.94,STAR_dimer|PF16544.1|5.9e-09 R_Transcript_30875:364-1239(+)
MSSGRYMAYSPSPSTTAPHSPHIGGLRSASSALAEQEKYLSELLAERQKLGPFMPVLPQCYRLLNQEILRVTTLLGNASILDQTGLEHARPLASGGMYSNGGADMNGWAPPYQSEMSSLLQSSAQNWRGSHGNSSGLIVKRTIRVDIPVDKYPNQYNFVGRLLGPRGNSLKRVEASTECRVLIRGRGSIKDPTKEDMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREILEDLLKPVDESQDFFKKQQLRELAMLNGTLREDGSHMSGSVSPFNNSLGMKRAKTQG*

Click here to download the sequence:
Link to NCBI Protein BLAST