Transcript Information: R_Transcript_309079.p1


Annotated TAIR IDAT4G35800.1
Annotated Gene NameRNA polymerase II large subunit
Annotated Gene Symbol(s)NRPB1, RPB1, RNA_POL_II_LSRNA_POL_II_LS, RNA_POL_I
Annotation TypeHomolog
Chromosome Positionchr4:16961115-16967892 | Reverse length=1839
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0470610416507
Replicate 20.98113553347187
Replicate 31.712653278217
Condition 2: 8 Hour
Replicate 11.3730391559203
Replicate 21.0449010206161
Replicate 30.67856488300512
Condition 3: 24 Hour
Replicate 10.85823578421324
Replicate 20.41224782973042
Replicate 30.61367396318404


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_309079.p1 GENE.R_Transcript_309079~~R_Transcript_309079.p1 ORF type:complete len:107 (+),score=14.27,RNA_pol_Rpb1_2|PF00623.16|4.7e-13 R_Transcript_309079:377-697(+)
ATGGAGAAGGCAGTAAGTACTAAGAAACAGAAATTGGAGAATCACAGGTACATTTCAAAAGGGTTAGGTTGTGATCTCAGCGATTTTCGCTGGACTCATCATTTCTCCTCAGAAATTGAGCAAGATGAGAGCTTTTCATCTGTTCTTAAGGTGGAAAGGCATCTGAATGATGGGGACTCGGTGCTTTTCAACTGGCAGCCCAGTCTTCATAAAATTTCCATTATCGGTTTTAGAATTAAGCTTATGCCATACTCTACAGTCTGGTCGAATGTCATAGAATTGAGCCTGTTATGGATTGTGGAGGATACCCTTTTGGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_309079.p1 GENE.R_Transcript_309079~~R_Transcript_309079.p1 ORF type:complete len:107 (+),score=14.27,RNA_pol_Rpb1_2|PF00623.16|4.7e-13 R_Transcript_309079:377-697(+)
MEKAVSTKKQKLENHRYISKGLGCDLSDFRWTHHFSSEIEQDESFSSVLKVERHLNDGDSVLFNWQPSLHKISIIGFRIKLMPYSTVWSNVIELSLLWIVEDTLLG*

Click here to download the sequence:
Link to NCBI Protein BLAST