Transcript Information: R_Transcript_309568.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value2E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10084508814762
Replicate 20.11600165975855
Replicate 30
Condition 2: 8 Hour
Replicate 10.13528102180799
Replicate 20.24708156730592
Replicate 30.1002851415491
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.24185309046295


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_309568.p1 GENE.R_Transcript_309568~~R_Transcript_309568.p1 ORF type:5prime_partial len:181 (+),score=28.13,zf-RVT|PF13966.2|8.5e+03,zf-RVT|PF13966.2|9.8e-17 R_Transcript_309568:1-543(+)
TGGAAGAAGCTTTGTCAGGAGAAGAAGTATGGTGGTATCCACATTAAAGAAGTTTTAAGCTGGAATAAGAGCTTGCTGATCAAATGGATTACTAAAGTCCATAATAGGACTGACTCTTTGTGGGTAAACTGGGTTAATGCCTACTATCTTAAAGGTACCAGTGTTTGGGATATTAAAACCAAGCATGGAGACTCATGGGCTTGGAAATCTATCTTGAAGATCAGAGATGAGTTTATGAGTATAGTCGGAGGAATGAATGCTGCCATCCAAGCCTTACAGCTTAAGAGAGCTGGCGACTCCACAACAACAAAAGTCTACCAGATCTTCAAAGGGCAACATATGCAGGTTCCATGGACAAATATTGTATGGGACTCTATCAATCTTCCCAAGCATGCAATTATAACAGTACTTGATATGCATAATGCACTTCCTACCATTGATAATCTTGCCAAAAGAGGAATGCATCTTGTCAATAGATGTATTTTGTGCAAACAACAGCAGGAGACTAGAGACCATCTCTTCTTTAATTGCACGTTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_309568.p1 GENE.R_Transcript_309568~~R_Transcript_309568.p1 ORF type:5prime_partial len:181 (+),score=28.13,zf-RVT|PF13966.2|8.5e+03,zf-RVT|PF13966.2|9.8e-17 R_Transcript_309568:1-543(+)
WKKLCQEKKYGGIHIKEVLSWNKSLLIKWITKVHNRTDSLWVNWVNAYYLKGTSVWDIKTKHGDSWAWKSILKIRDEFMSIVGGMNAAIQALQLKRAGDSTTTKVYQIFKGQHMQVPWTNIVWDSINLPKHAIITVLDMHNALPTIDNLAKRGMHLVNRCILCKQQQETRDHLFFNCTFA*

Click here to download the sequence:
Link to NCBI Protein BLAST