Transcript Information: R_Transcript_309646.p1


Annotated TAIR IDAT5G61140.2
Annotated Gene NameU5 small nuclear ribonucleoprotein helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24589999-24603311 | Forward length=2157
E-Value3E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.40584306542395
Replicate 20
Replicate 30.3008554246473
Condition 3: 24 Hour
Replicate 10.25367742793043
Replicate 20.48740903625585
Replicate 30.12092654523148


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_309646.p1 GENE.R_Transcript_309646~~R_Transcript_309646.p1 ORF type:internal len:181 (+),score=29.56 R_Transcript_309646:2-541(+)
CTCATTCCTCCGAGTTCTGCGATTTCTCTCGATGAATCGGAACTAGCGCGAAAGATAGTGTATCAGTGGGATGAAGCTTCTCCTGAATTGCAACAGGCGTACAAACAGTTTATCAGTGCCGTTGTTGAGTTGGTAGATAGGGAAGTAGCATCGGAGGAGTTCCGTGAGGTGGCATGGGCCGCATATCGTCTGTTTGGTGACCTGGAAGTGGAGGAGGAGGATCACAACAGAAGGATTGTAGAGAAAAAGTCGGAATTTCAAAAATTATTGGGCCATGCCATTTCCGATGGTACCCTACGGAAAGTCGTACATTTTGCACAGAGAGATACTTCGATTGAAGATGAGGACATTCTGGGACTAGAAGGCTTGGCTCCGACAACTTCAGTGTACAACGACTGGCCTGCAACTGATGGCGTTGACAATCTTTTTTCTGTTGGTGGGGTTTCATATGACTTAAACTGGTTGAGGGAATCATGTGACCAAATAGTGCAGGGAAGTTCCTCACAGCTTTCACGAGATGAACTAGCCATGGCGATTTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_309646.p1 GENE.R_Transcript_309646~~R_Transcript_309646.p1 ORF type:internal len:181 (+),score=29.56 R_Transcript_309646:2-541(+)
LIPPSSAISLDESELARKIVYQWDEASPELQQAYKQFISAVVELVDREVASEEFREVAWAAYRLFGDLEVEEEDHNRRIVEKKSEFQKLLGHAISDGTLRKVVHFAQRDTSIEDEDILGLEGLAPTTSVYNDWPATDGVDNLFSVGGVSYDLNWLRESCDQIVQGSSSQLSRDELAMAIC

Click here to download the sequence:
Link to NCBI Protein BLAST