Transcript Information: R_Transcript_309648.p1


Annotated TAIR IDAT5G61140.2
Annotated Gene NameU5 small nuclear ribonucleoprotein helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24589999-24603311 | Forward length=2157
E-Value1E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.6004263471947
Replicate 20.27626711074076
Replicate 30.30140444205464
Condition 2: 8 Hour
Replicate 10.32218243351638
Replicate 20.29422212948928
Replicate 30.83592943646519
Condition 3: 24 Hour
Replicate 10.45311461633626
Replicate 20.14510038743801
Replicate 30.7199902857532


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_309648.p1 GENE.R_Transcript_309648~~R_Transcript_309648.p1 ORF type:5prime_partial len:152 (-),score=26.91 R_Transcript_309648:7-462(-)
GCGGTTGTTGAGTTCGTAGATAGGGAAGTGGCGTCGGAGGAGTTCCGTGAGGTGGCATGGGCTGCATATCGTCTGTTTAGTGACCTGGAAGTGGAGGAGGAGGATCACAACAGAAGGATTGTAGAGAAAAAGTCGGAATTTCAAAAATTATTGGGCCATGCCATTTCCGATGGTACCCTACGGAAAGTCGTACATTTTGCACAGAGTCTGTCTAGCCTGCAACCTAAAAATAATACAGCTTCTCTGAACTCAGAGGAGAAATATATTGACATTGATGTAGAATTTGGATCCAACCTTGATTTTAGACCTCCTTCACGGTTTTTAGGAGATACTTCGATTGAAGATGAGGACATTCTGGGACTAGAAGGCTTGGCTCCGACAACTTCAGTGTACAACGACTGGCCTGCAACTGATGGTGTTGACAATCTTTTTTTCTGTCGGTGGGGTTTCATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_309648.p1 GENE.R_Transcript_309648~~R_Transcript_309648.p1 ORF type:5prime_partial len:152 (-),score=26.91 R_Transcript_309648:7-462(-)
AVVEFVDREVASEEFREVAWAAYRLFSDLEVEEEDHNRRIVEKKSEFQKLLGHAISDGTLRKVVHFAQSLSSLQPKNNTASLNSEEKYIDIDVEFGSNLDFRPPSRFLGDTSIEDEDILGLEGLAPTTSVYNDWPATDGVDNLFFCRWGFI*

Click here to download the sequence:
Link to NCBI Protein BLAST