Transcript Information: R_Transcript_309661.p1


Annotated TAIR IDAT1G53640.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 1186 Blast hits to 678 proteins in 89 species: Archae - 0; Bacteria - 50; Metazoa - 731; Fungi - 92; Plants - 226; Viruses - 4; Other Eukaryotes - 83 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:20020885-20025461 | Reverse length=290
E-Value1.6E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.4588294444019
Replicate 25.6905860941369
Replicate 35.7802048139824
Condition 2: 8 Hour
Replicate 19.382434232122
Replicate 211.493911226778
Replicate 314.080221322356
Condition 3: 24 Hour
Replicate 118.022951468478
Replicate 215.871541444621
Replicate 318.819334870977


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_309661.p1 GENE.R_Transcript_309661~~R_Transcript_309661.p1 ORF type:5prime_partial len:107 (+),score=38.29 R_Transcript_309661:2-322(+)
AATGCAATAAATAGTGGTGGTTGTGGTGCTGGCTGTGGTGGTTGTGGTGGTGGCTGTGGAAATGCAATAAATAGTGGTGGTTCTGGTGCTGGCTGTGGTGGTGGCTGTAAAAATGGAGTGAAGAGTGGAGGCTGTGGTGGTTGTCGTGCTGGGGGCTGCGGTGGTGGCTGTGGTGGTGGATGTGGAAATATTCTGAAGAGCGGAGGCTGCGGTGGTTGTGGCAGTGGTTGCGGCAACAATATACCACATGGTAATACTGCTGGTGTCAATGACATCCTGAAGGTGGACTCCTCCATAGTGAACAAGCCTATTGCAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_309661.p1 GENE.R_Transcript_309661~~R_Transcript_309661.p1 ORF type:5prime_partial len:107 (+),score=38.29 R_Transcript_309661:2-322(+)
NAINSGGCGAGCGGCGGGCGNAINSGGSGAGCGGGCKNGVKSGGCGGCRAGGCGGGCGGGCGNILKSGGCGGCGSGCGNNIPHGNTAGVNDILKVDSSIVNKPIAA*

Click here to download the sequence:
Link to NCBI Protein BLAST