Transcript Information: R_Transcript_30982.p1


Annotated TAIR IDAT5G21160.3
Annotated Gene NameLA RNA-binding protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7198817-7203879 | Reverse length=833
E-Value8.3E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.542118270738
Replicate 215.907629082527
Replicate 319.141246484456
Condition 2: 8 Hour
Replicate 119.764143887871
Replicate 222.572944998794
Replicate 326.012845567678
Condition 3: 24 Hour
Replicate 126.441394415048
Replicate 219.963611577456
Replicate 324.101845519292


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30982.p1 GENE.R_Transcript_30982~~R_Transcript_30982.p1 ORF type:complete len:949 (+),score=232.98,La|PF05383.13|1e-21 R_Transcript_30982:868-3714(+)
ATGGCAATGGCAGAGAATGAGGGTAGTAGTGGGGATGAAAGAAAGGAGTTTGTTTCTGGGCCTGTTTCTGGGCCAAAGTCCCCTTGGAAAAGGCCTGTTGATAAGCCTGCTGATGCTCCTGTGATGGGGGCTGAAGCTTGGCCTGCACTTTCTGATGCTCAGAAACCCAAGAACTCTGAACCAGGTTCGAAACCGGGTTCCGATGGGCCTAATTCTGGCCCACACCACCAGCCAACTTCTGGTAATGGCCAGGCATCAGCTGGGCCGCAAAAATATTCAAATTATTCGCACAAACATGGGCAAGGTCGTCACCATAAAGCTGGATCAAAGCGCAACCAAAATGGTGCCCCCCCTTTTCCTCCTGTACCTTATTATCAGCCAGTGTTGCCTCATGTATTCCCTCCTGTGGTTCCTTCTCCTGTTTCGGTTCCTGCATATGGCTATCAGCCGTTTCCTCCTCCCCCTTTCTCTGGTGCCGAGAATCAAATGGCCAAAGCTGGCAATGAAACTCCCATGCAAGCTTTTGGTCCGCCTACCCATTCTGTTGAAGCCAATAGGAATATCCAACCATCACCACGAGGAGATCCTGGTGTGAATGGTCCCAACCTCTCAAACAGAAGACCCAATGTCCCTGAAGCTGGTGGTCATCCATACACAGCATGGCATTATCCACGAGGATATGGCCCCAGGGAAAGCATACTAAACCAAGCTATGGCTAGGGCTTACGCAAGACCTTCATTTTTTGGGCCAGCCCCACCGTTCGTAGGTGGACCAAGCTTCCCTGGCCCTGCGCCAATGTATTACATTCCTGCTGCACCTCCTGGTTCTATTAGGGCACCTTTCCCAGCACGCTTTGCTCCACATCCAATGAATCCTATGGTCCCCATGCTACCACCAGAGTCATTAGTATTGATAGATAACATTGTGCAGCAGATTGCGTACTATTTCAGTGACGAGAATTTGCAGACTGATCATTACTTAATTTCTCAAATGGACGATCAAGGATGGGTTCCAATATCAATCATTGCTGATTTTAAAAGGGTTAAACGAATGAGTACAGACATACCTTTTATTCTGGATGCACTTCGGTATTCTTTGGCTGTTGAAGTGCAGGGTGACAAGGTTAGGAAACGTGTTAATTGGTTGAAGTATGTAGCAGCTTCTGCAGAGCATACATCTCCACAGAAAGCTCAGATAACCAAGGACCAAATTGCTGGCATAGCTTCTGGTGATATCAATAAAGATGGACTTGGTTACCAAAAAAAGGAGGATACTTCTGAAGCTGGCATCATTCAGTCATCAAATGTTGATAGTTTAGCAGAGACACTGGCAAAAAAAGATAATCTGGAAGCTGAAAATGATCCCAGTGCTTGTTCTAGCAGCGAAAAGGCTGTAAATGACAGTGAGAAACAAGCATCAGCCACTGAACAGGGATCTTCTCATGCTAGTCTTAATTCCCAATCAATCATTGATCATTCAGACCCTGATGTGAGAAATAAATCGCCAGTTCAGGTTCCATCTAAAACAGCTAAACCTACAACAATTATTGCTCATGAAAATAACATGGTTGGAGGGCCAACTGAGTTTGTTGCAAATCACGATGACCATTCAAATGATTTTTCCAGCACTTTTATGCTTGATGAAGAACTAGAACTGGAGCAGAAAATGACTAAAAGAGATGTCCACAATTCCTTTAGAAGGATTGAGGATGATGATGACGAGACATTGGTAAATGATCAGGATGTTGAGAGACTGATGATCGTCACACAGAATAGCAGCAGTATCATTGGTGCAGGAACGAATATACAGCAGTCAGTAACCATCTCCAATGAGCTTGCATCTGCAATCAATGATGGCCTTTACTTTTATGAGCAGGAGCTCGAAGCAAAAAGATCTAACCGTAGGAAGAACAACAATATGAATGCTGAGAGCAAGGATGGGAACTCCAGATCATTTAACATTTCTACAGGTTTTTCCAACTCAAGGCCAGGTGAAAATTCTTCTGGAGGACATACTCACGATGAGGCAGGCAATTCTAATAACAGAAGGAAGCACAGCAAAGGCTCTTCTAAGCAGCAATCAACCCACAAACAGCGTTTTTTTTCAAGCAATTTTAGGAACCATGGAGGTGGACGCAACTCGTTTGGAGTTATATCAGAAAGTCCTCCAAGTAATTCAGTTGGGTTCTTCTTCAGCTCTACGCCACCTGAGAATCATGGTCTCAGGTCTTCAAAATTGAGTGCTTCTCCTCATGGGAATGTTGCGGGCAGTAGTCCCCCAGTGGGCTCCTTGCCAAAGTCCTTTCCTCCATTTCAGCATCCAAGCCACCAATTACTAGAAGAAAATGGCTTCAAACAGCAGAAGTACCTGAAGTACCACAAGAAGTGTTTAAATGATAGGAAGAAGCTGGGAGTTGGTTGCAGTGAGGAAATGAATACCCTTTATAGATTTTGGTCTTATTTCCTTAGAGATGCATTTGTTCCTTCGATGTATGATGAGTTCCAGAAACTTGCTTTGGAGGACGCAGCGGCGAATTACAATTATGGACTGGAATGTTTATTCAGATTCTACAGCTATGGATTAGAGAAGGAATTCAGAGATGACCTATATGAGGATTTTGAGCAGCTCACTCTCGATACTTACAAGAAAGGCAATCTGTATGGTCTCGAAAAATACTGGGCGTTCCACCACTACCGGGAAGCACGTGACCACAAGGAGCCTTTGAAGAAGAATCCTGAGTTGGAGAAGATGCTGAGGGAGGAGTATCGTAGTTTAGAGGCCTTCCGTGCCAGAGAGAAGCCTGCGGTGAAGGATGGCAATCCGCCTGGTCCTGCAGCGGCTTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30982.p1 GENE.R_Transcript_30982~~R_Transcript_30982.p1 ORF type:complete len:949 (+),score=232.98,La|PF05383.13|1e-21 R_Transcript_30982:868-3714(+)
MAMAENEGSSGDERKEFVSGPVSGPKSPWKRPVDKPADAPVMGAEAWPALSDAQKPKNSEPGSKPGSDGPNSGPHHQPTSGNGQASAGPQKYSNYSHKHGQGRHHKAGSKRNQNGAPPFPPVPYYQPVLPHVFPPVVPSPVSVPAYGYQPFPPPPFSGAENQMAKAGNETPMQAFGPPTHSVEANRNIQPSPRGDPGVNGPNLSNRRPNVPEAGGHPYTAWHYPRGYGPRESILNQAMARAYARPSFFGPAPPFVGGPSFPGPAPMYYIPAAPPGSIRAPFPARFAPHPMNPMVPMLPPESLVLIDNIVQQIAYYFSDENLQTDHYLISQMDDQGWVPISIIADFKRVKRMSTDIPFILDALRYSLAVEVQGDKVRKRVNWLKYVAASAEHTSPQKAQITKDQIAGIASGDINKDGLGYQKKEDTSEAGIIQSSNVDSLAETLAKKDNLEAENDPSACSSSEKAVNDSEKQASATEQGSSHASLNSQSIIDHSDPDVRNKSPVQVPSKTAKPTTIIAHENNMVGGPTEFVANHDDHSNDFSSTFMLDEELELEQKMTKRDVHNSFRRIEDDDDETLVNDQDVERLMIVTQNSSSIIGAGTNIQQSVTISNELASAINDGLYFYEQELEAKRSNRRKNNNMNAESKDGNSRSFNISTGFSNSRPGENSSGGHTHDEAGNSNNRRKHSKGSSKQQSTHKQRFFSSNFRNHGGGRNSFGVISESPPSNSVGFFFSSTPPENHGLRSSKLSASPHGNVAGSSPPVGSLPKSFPPFQHPSHQLLEENGFKQQKYLKYHKKCLNDRKKLGVGCSEEMNTLYRFWSYFLRDAFVPSMYDEFQKLALEDAAANYNYGLECLFRFYSYGLEKEFRDDLYEDFEQLTLDTYKKGNLYGLEKYWAFHHYREARDHKEPLKKNPELEKMLREEYRSLEAFRAREKPAVKDGNPPGPAAAY*

Click here to download the sequence:
Link to NCBI Protein BLAST