Transcript Information: R_Transcript_30989.p1


Annotated TAIR IDAT1G69260.1
Annotated Gene NameABI five binding protein
Annotated Gene Symbol(s)AFP1
Annotation TypeOrtholog
Chromosome Positionchr1:26039314-26040570 | Forward length=345
E-Value3.5E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8276284718035
Replicate 24.7598665931154
Replicate 37.2124488652873
Condition 2: 8 Hour
Replicate 16.784496584879
Replicate 29.1809162219477
Replicate 311.018987807338
Condition 3: 24 Hour
Replicate 116.191904341958
Replicate 210.055420300238
Replicate 313.617791077238


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_30989.p1 GENE.R_Transcript_30989~~R_Transcript_30989.p1 ORF type:3prime_partial len:397 (+),score=98.73,NINJA_B|PF16136.1|2.3e+03,NINJA_B|PF16136.1|1e-22,NINJA_B|PF16136.1|1e+04,EAR|PF07897.7|6.5e-13,EAR|PF07897.7|1.2e+03 R_Transcript_30989:483-1670(+)
ATGGACACTTCATCTCAGTTGTATTCAACGAATACTTCAAAACCAATGGGAGAAGCTGTGGGAACAACTACCGGGACTAGTTTTAGTAGTAGTAGTCATAGGAGAAGTAGAGAAATGGAGAGTCTATCACTTGAAATCAGCAAGTATCCTAGAGATCTCTTACAAAGATTCTTAGGGACAACAAATCCATCATCTTCATCATCAACAACAACAATAGCAAGAACAAGAACAGCAACATTAGATGATTTTAAGTTACGATGTGGTGGTGGTGACGTGGATGAAGATGATGGGGGTTTAAATCTTGGGCTCGGGTTATCTTTAGGGGGTAAGTTTGGGGTAGATAAGACTCATAAAGGGTTAATAAGGTCATCCTCGATCGTAGGGACTATGCCCTTGATTAGGGAGGATGACAAGGTGGCACCGCCACCTCCAGCGGCGATGCACACCTTAGTTAGGACTTCGTCGTTGCCGGTCGAGACTGAGGAGGAGTGGAGGAAGAGGAAGGAGATGCAGACATTGAGAAGGATGGAGGCCAAAAGGCGCCGCTCCGAGAAGCAAAGGATTTTGAGGGAAAGTGGTGGTTCTGGTGGTGGTGAGGATAAAGGGGTTGAGAATTTGAACTTTAGGGGGAGGTTGGAAAGAGAACAGCAATGTTTGGGGATAAGCAGCAAGGTTCCTGGTGGTGGTGATTCAGGTTCATCTGTGGGAGGAAACCCTTGTGGTTCATCAGCCCTTCCTCCTAATGTGGAGGTCAAAAGAAGAACTACTTTTGGTAGTTTGCAAGGGTTTTTAATGGCTGAAGCTCAGGCTCAGTCTCAGTCTCAAGCTCAGGGTTCAGGAGAATCACAAGGAGGTAGCTCCTCAGGTGCCTCTGAGCTAGATAGTAGAACTCATCATGTCCTGTCTTTAGGTGCCAGCAGTTGTGGCGAAGCAGCAAGAAGCCCTGCTAGTATTCACTCGTTACAAGAACGGGGCAGCCAGGATTCAGGGAGTAAAGGTGAAAGCACTCAAGCAGCCTGTGCACCCGAGACAGACACTTCATCAAAGCCTCCCGATGCTGATGTCAACACAAAGAAGCGAGAGACAGGCACAGGCAGGGTTGAGGATATGCCATGTGTGTTCACTATAGGGGACGGCCCTCACGGGAGAAAGGTGGAAGGTATTCTATACAGGTACGGTAAAGGAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_30989.p1 GENE.R_Transcript_30989~~R_Transcript_30989.p1 ORF type:3prime_partial len:397 (+),score=98.73,NINJA_B|PF16136.1|2.3e+03,NINJA_B|PF16136.1|1e-22,NINJA_B|PF16136.1|1e+04,EAR|PF07897.7|6.5e-13,EAR|PF07897.7|1.2e+03 R_Transcript_30989:483-1670(+)
MDTSSQLYSTNTSKPMGEAVGTTTGTSFSSSSHRRSREMESLSLEISKYPRDLLQRFLGTTNPSSSSSTTTIARTRTATLDDFKLRCGGGDVDEDDGGLNLGLGLSLGGKFGVDKTHKGLIRSSSIVGTMPLIREDDKVAPPPPAAMHTLVRTSSLPVETEEEWRKRKEMQTLRRMEAKRRRSEKQRILRESGGSGGGEDKGVENLNFRGRLEREQQCLGISSKVPGGGDSGSSVGGNPCGSSALPPNVEVKRRTTFGSLQGFLMAEAQAQSQSQAQGSGESQGGSSSGASELDSRTHHVLSLGASSCGEAARSPASIHSLQERGSQDSGSKGESTQAACAPETDTSSKPPDADVNTKKRETGTGRVEDMPCVFTIGDGPHGRKVEGILYRYGKGE

Click here to download the sequence:
Link to NCBI Protein BLAST