Transcript Information: R_Transcript_310940.p1


Annotated TAIR IDAT5G14230.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: XB3 Ortholog 2 in Arabidopsis thaliana (TAIR:AT5G57740.1); Has 66374 Blast hits to 25358 proteins in 1201 species: Archae - 121; Bacteria - 8133; Metazoa - 29530; Fungi - 5885; Plants - 3349; Viruses - 785; Other Eukaryotes - 18571 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4591883-4595775 | Forward length=751
E-Value4E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.84504448864439
Replicate 21.7496917013582
Replicate 31.4846959553062
Condition 2: 8 Hour
Replicate 11.3603258304025
Replicate 21.6563616178656
Replicate 31.8487751557801
Condition 3: 24 Hour
Replicate 11.7005783131633
Replicate 21.8379382408814
Replicate 30.60799179685826


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_310940.p1 GENE.R_Transcript_310940~~R_Transcript_310940.p1 ORF type:internal len:108 (-),score=15.72 R_Transcript_310940:1-321(-)
CTCTTGATTTCGCAAGGAGCTCGCTGTGATTTTAAAAACACCAGAGGTGAAACTGTGCTCTCACTGGCCAGAAAGAAAGGCGGAAAGGAAAATGCTACTGAATGTGTTATCCTGGATGAACTCGCATGTCAGGTGGTGTTGAGTGGTGCTCATGTCCAGAAACATACAAGAGCTGGAAAAGGGTCGCCCCATGCTAAAACAATCCGAATGGTCGTGGGCACTGGAGCCTTACAGTGGGGCAAATCCAGCCAGAGAAATGTGATTTGTCGAGAAGCTGAAGCAGGGCCCAGTAATCACTTTCGAAAGAACAGGAAGGGCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_310940.p1 GENE.R_Transcript_310940~~R_Transcript_310940.p1 ORF type:internal len:108 (-),score=15.72 R_Transcript_310940:1-321(-)
LLISQGARCDFKNTRGETVLSLARKKGGKENATECVILDELACQVVLSGAHVQKHTRAGKGSPHAKTIRMVVGTGALQWGKSSQRNVICREAEAGPSNHFRKNRKGK

Click here to download the sequence:
Link to NCBI Protein BLAST