Transcript Information: R_Transcript_310989.p1


Annotated TAIR IDAT2G04890.1
Annotated Gene NameSCARECROW-like 21
Annotated Gene Symbol(s)SCL21
Annotation TypeHomolog
Chromosome Positionchr2:1720575-1721816 | Reverse length=413
E-Value7E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5099728428974
Replicate 23.5946973475374
Replicate 33.8326448118076
Condition 2: 8 Hour
Replicate 13.4775644769434
Replicate 23.8718258440963
Replicate 34.0258436006306
Condition 3: 24 Hour
Replicate 15.2258043689521
Replicate 25.4065420626707
Replicate 36.1319639589751


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_310989.p1 GENE.R_Transcript_310989~~R_Transcript_310989.p1 ORF type:complete len:514 (+),score=100.40,GRAS|PF03514.10|9.2e-88 R_Transcript_310989:125-1543(+)
ATGGAAGCCATACAGGAAAAGACTGAGGATCTTTTGAGTCTTGGTTTAGCTATTGTCAGTCACTCTAAGTCTAACCATGCTGAGAGGAAGTCAAAGAGAAAGAGGCATGAACCTTCTATTAGTCCTCCTGTCAGTTCAGGTGAAGGTTTTGAAAGGAAGATATTCAGGCTGCTCCAAGAAAGGGAGCGAATGTTGAGCCTCGTGCAACGAGGAAAAGCTGGTGTTCAAGAAGGAGGGAAGGGTCTTCATCTCATACATTTGCTGCTGGTATCCGCTACTTTGATCAATGAAAACAAAATTAGCTGTGCCATTGATAATCTGATTGAGCTTTACAGATATGTGTCTGTGAGTGGTGATTCAGGGCAACGCGTTGCTGCTTATTTTGCTGATGGACTTCTTGCACGCCTCTTAACACCGGAATCTCCATTTCATCAAATTGTAATGAGCAAACCAACACCTGCAGAAGAGTTCTTAGCCTTCACTCATCTGTACAGAGTCTCTCCCCTTTACCAGTTTGCTCATTTCACTGCCAATCAGGCTATAATTGAAGCCTTTGAAAGGGAGCTGGAAGAACAGAATAACAAGAGCTGGGCCCTACATGTGATTGATTTCGACATATCTTATGGTTTTCAGTGGCCTTCTCTTATACAGTCTTTGTCTGACAAGGCAACCAGTTCAAGCCGTGTACTGTCACTTCGAATTACAGGGTTTGCGAAAAGCTTGGAGGAGCTAATTGAGACTGAGAGTAGGCTTGTAAGCTTCTCTAAGAGCTTTGAGAATATAGTGTTTGAATTTCAGGGGTTGTTGAGAGGCTCAAATCTCATGAATTTGAATAGAAGGGAGAATGAAACAGTTGCAGTGAACCTGGTATTTCACCTCAGTAGTTTGATTGATATTCTGAAGATTTCGGAAACATTGACAGTTGTGGATTCACTAAAGCCTTCAATTGTAGTATTAGTTGAAAGAGAAGGAAGTCAAAACAGTTGTGGCTTTCTCTCAAGTTATGTGGATTCTTTGCATTATTATGCTGCAATTTTTGATTCCCTAGACGATTGCCTTCCACTGGATAGTTCCGAGAGACTGAGTATAGAGAAGAATCATCTAGGAAAAGAGATCAAAGAAGCAATGGATTGTGAGAAGGATGAGGTGAATTTTTCAAGATTTGAAGTGATGAAAACTTGGAAAGGAAGGATGGAAAGTCATGGATTTTCGAGTGTTGAGTTAAGTTCAAGAACAATGATTCAAGCGAAGTTGCTAATGAAGATGGGAAGCCATTATCATCCACATTTTGAAGGAGAGGCTGGATGTGGTGTTGGGTTCAGAGTTTATGAAAGAGATGATGGAAGGTGTATTTTTCTTGGCTGGCAAGATAGGTTTCTTGTGACGGCCTCTGCATGGCGTTGTGTACAGCATATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_310989.p1 GENE.R_Transcript_310989~~R_Transcript_310989.p1 ORF type:complete len:514 (+),score=100.40,GRAS|PF03514.10|9.2e-88 R_Transcript_310989:125-1543(+)
MEAIQEKTEDLLSLGLAIVSHSKSNHAERKSKRKRHEPSISPPVSSGEGFERKIFRLLQERERMLSLVQRGKAGVQEGGKGLHLIHLLLVSATLINENKISCAIDNLIELYRYVSVSGDSGQRVAAYFADGLLARLLTPESPFHQIVMSKPTPAEEFLAFTHLYRVSPLYQFAHFTANQAIIEAFERELEEQNNKSWALHVIDFDISYGFQWPSLIQSLSDKATSSSRVLSLRITGFAKSLEELIETESRLVSFSKSFENIVFEFQGLLRGSNLMNLNRRENETVAVNLVFHLSSLIDILKISETLTVVDSLKPSIVVLVEREGSQNSCGFLSSYVDSLHYYAAIFDSLDDCLPLDSSERLSIEKNHLGKEIKEAMDCEKDEVNFSRFEVMKTWKGRMESHGFSSVELSSRTMIQAKLLMKMGSHYHPHFEGEAGCGVGFRVYERDDGRCIFLGWQDRFLVTASAWRCVQHI*

Click here to download the sequence:
Link to NCBI Protein BLAST