Transcript Information: R_Transcript_311285.p2


Annotated TAIR IDAT5G10710.2
Annotated Gene NameINVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3379619-3382648 | Forward length=312
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43983038445105
Replicate 20
Replicate 30.27598479031509
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.27660008708077
Replicate 20
Replicate 30.2637072853843


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_311285.p2 GENE.R_Transcript_311285~~R_Transcript_311285.p2 ORF type:5prime_partial len:83 (+),score=2.61 R_Transcript_311285:2-250(+)
TCTTTTCACCATAGCTATTACTTCTTACACAGGTTATATGTTGTTTGGAAGGTGCAAGGATTGGCATACAGTATGAAACATCTTTTGCCGGTAACGATGACTACTTTGTCATATGTAACAAATTCTGATCTTGTCTTGAAGTCCAATCACTGGACAAATCTTGTTGTTTTGTTGTTGATTTCAAAATCATGGCATGTAAGCAAAGTAGTGAAAGATTGCTTCTTTATATTAAAGTTAGGACCGTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_311285.p2 GENE.R_Transcript_311285~~R_Transcript_311285.p2 ORF type:5prime_partial len:83 (+),score=2.61 R_Transcript_311285:2-250(+)
SFHHSYYFLHRLYVVWKVQGLAYSMKHLLPVTMTTLSYVTNSDLVLKSNHWTNLVVLLLISKSWHVSKVVKDCFFILKLGPS*

Click here to download the sequence:
Link to NCBI Protein BLAST