Transcript Information: R_Transcript_311466.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.181621502037
Replicate 20.3133776181537
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.22249633672822
Replicate 30.090306520499438
Condition 3: 24 Hour
Replicate 10.22843589281298
Replicate 20.10972765617203
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_311466.p1 GENE.R_Transcript_311466~~R_Transcript_311466.p1 ORF type:3prime_partial len:201 (+),score=58.15 R_Transcript_311466:55-654(+)
ATGAGTAAAAAGGGGAATCAACAAAGCAAAATTGGTTTGATTGTAAAGACTGCTGGTGAAATCGAATCGGATTTGGCAAACAAAGAGAATGAAATAAATACTCTGACTACAAGGGTCAAAAAACTTGAATCTGACATGACAGAAGCCAACAAGAAACTGACAGAAGCCAACAAGAAACTGACAGAAGCCAACAAACTGACAGAAGCCAACAAGGAACTGACAGAAGCCAACAAGACACTGACAGAAGCTAACAAGAAACTGAGAGAAGCCAACGAGAAACATGAAAAATCTGTCTTTGAGCTCGTTGAGGAAGTCAAAAATCTGAAAATGAAGGAACAACTTCTTCAGGTTGAGATCAAGAGTTTGAAGGAATCCAATCAAACTGATAAAGAAATCATCAATGATGTCGAAAAAATCATCGAAATGACTGGTGAATTGGAAGAAATGAAAAAAAATAAGCTTGGCTTGGAAACGGATCTTGCAAAAAAGATACAACTGAGGAAAAGAGAGCACCCAAACAACTCTGAGACACAAAATCAAGAAAAGAGATCAAAAACTGATGAATCTTCGAGTGACCCTTCTTCTCCAAGCGTCTCTTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_311466.p1 GENE.R_Transcript_311466~~R_Transcript_311466.p1 ORF type:3prime_partial len:201 (+),score=58.15 R_Transcript_311466:55-654(+)
MSKKGNQQSKIGLIVKTAGEIESDLANKENEINTLTTRVKKLESDMTEANKKLTEANKKLTEANKLTEANKELTEANKTLTEANKKLREANEKHEKSVFELVEEVKNLKMKEQLLQVEIKSLKESNQTDKEIINDVEKIIEMTGELEEMKKNKLGLETDLAKKIQLRKREHPNNSETQNQEKRSKTDESSSDPSSPSVSC

Click here to download the sequence:
Link to NCBI Protein BLAST