Transcript Information: R_Transcript_31188.p2


Annotated TAIR IDAT5G17240.1
Annotated Gene NameSET domain group 40
Annotated Gene Symbol(s)SDG40
Annotation TypeOrtholog
Chromosome Positionchr5:5666854-5668849 | Forward length=491
E-Value1.3E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.74986787201064
Replicate 30.61357332846837
Condition 2: 8 Hour
Replicate 11.7489903533747
Replicate 21.1979043843492
Replicate 31.6206795196774
Condition 3: 24 Hour
Replicate 10.81992168670372
Replicate 21.3784536806611
Replicate 31.3679815429311


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31188.p2 GENE.R_Transcript_31188~~R_Transcript_31188.p2 ORF type:3prime_partial len:112 (+),score=16.80 R_Transcript_31188:686-1018(+)
ATGCTATTTGAAGGTTCCAATTGTGCTGAAAATTCTTTGTTGCTAGTTACTTCCAATAATGGAGTTGACACGGGGGATCCCATTTTAGACGTTGAACATGTTGATGCCTGTTCAGGGCGGCTAACTGATGGTGGTTACGAGGAAGAGTTCGCAGCATATTGCTTTTATGCCAAGAAAAATTATGGAAAGGGTGAGCAGGTTTTATTAAGCTATGGAACGTACACAAACTTGGAGCTTCTTGAGCATTATGGATTTCTTCTGAATGAGAACCCGAACGACAAGGTCTTCATACCCCTAGGACTCAATGTATTCATGTCCTATTCATGGCCAGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31188.p2 GENE.R_Transcript_31188~~R_Transcript_31188.p2 ORF type:3prime_partial len:112 (+),score=16.80 R_Transcript_31188:686-1018(+)
MLFEGSNCAENSLLLVTSNNGVDTGDPILDVEHVDACSGRLTDGGYEEEFAAYCFYAKKNYGKGEQVLLSYGTYTNLELLEHYGFLLNENPNDKVFIPLGLNVFMSYSWPA

Click here to download the sequence:
Link to NCBI Protein BLAST