Transcript Information: R_Transcript_31189.p2


Annotated TAIR IDAT5G17240.1
Annotated Gene NameSET domain group 40
Annotated Gene Symbol(s)SDG40
Annotation TypeOrtholog
Chromosome Positionchr5:5666854-5668849 | Forward length=491
E-Value1.3E-99
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1069162148117
Replicate 22.7120221371052
Replicate 32.8633421995191
Condition 2: 8 Hour
Replicate 13.3668064302462
Replicate 23.9131543222075
Replicate 33.7815855459139
Condition 3: 24 Hour
Replicate 14.7828765057717
Replicate 22.1136289770137
Replicate 32.3711680077472


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31189.p2 GENE.R_Transcript_31189~~R_Transcript_31189.p2 ORF type:complete len:240 (+),score=58.69 R_Transcript_31189:45-722(+)
ATGGAGCAGCAGCAAGCAAGTCTGGAAAGCTTTCTCAAGTGGGCAGCTGAGCTTGGTGCCTCAGACTCACCTCCTTCTTCTTCAACCTCTTCTTCCTCTTGTTTGGGTCATTCTCTATGTATCTCCTATTTTCCCACAACTGGAGGGAGGGGTTTAGCGGCTGTACGTGAGCTTAAGAAAGGGGAAATGATTCTGAGAGTCCCCAAATCTGCATTAATGACAAACGAGAGTGTGACCCGGAATGATCAAAGACTTTCTCTTGCTCTTAAATTGCACCCTTCTCTTTCCAATACCCAGATGTTGACTGTTTGCCTATTGGCTGAAATGAACAAGGGAAGGAGGTCTGCTTGGTACCCTTATCTAATGCAGTTGCCCAGAAGCTATGAAACTCTTGCAAGTTTTGGTCTGTTTGAGACAAAAGCATTGCAAGTAGATGATGCTATCTGGGTAACAGAGAAAGTTATATCAAAGGCTGAGTTAGATTGGAGAGGAGCTATTGCACTGATGGAGCAACTGGAGCTGAAACATCAGTTTCTGACTTTCAAGGCCTGGCTCTGGGCTTCTGCGACAATATCATCACGCACCTTGCATGTACCGTGGGATGATGCTGGGTGCTTGTGCCCTGTGGGTGACTTTTTTAATTATGCCGCTCCTGGAGAAGAGCTAGATGCTATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31189.p2 GENE.R_Transcript_31189~~R_Transcript_31189.p2 ORF type:complete len:240 (+),score=58.69 R_Transcript_31189:45-722(+)
MEQQQASLESFLKWAAELGASDSPPSSSTSSSSCLGHSLCISYFPTTGGRGLAAVRELKKGEMILRVPKSALMTNESVTRNDQRLSLALKLHPSLSNTQMLTVCLLAEMNKGRRSAWYPYLMQLPRSYETLASFGLFETKALQVDDAIWVTEKVISKAELDWRGAIALMEQLELKHQFLTFKAWLWASATISSRTLHVPWDDAGCLCPVGDFFNYAAPGEELDAI*

Click here to download the sequence:
Link to NCBI Protein BLAST