Transcript Information: R_Transcript_31191.p1


Annotated TAIR IDAT5G17240.1
Annotated Gene NameSET domain group 40
Annotated Gene Symbol(s)SDG40
Annotation TypeHomolog
Chromosome Positionchr5:5666854-5668849 | Forward length=491
E-Value1E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4224301790098
Replicate 23.9368063280559
Replicate 35.4880725490782
Condition 2: 8 Hour
Replicate 14.9311811352091
Replicate 26.7548497228582
Replicate 35.9244840219319
Condition 3: 24 Hour
Replicate 17.6526024092347
Replicate 26.6625261231952
Replicate 35.1679302732952


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31191.p1 GENE.R_Transcript_31191~~R_Transcript_31191.p1 ORF type:complete len:288 (+),score=52.16,Rubis-subs-bind|PF09273.7|3.2e-09 R_Transcript_31191:1512-2375(+)
ATGCTATTTGAAGGTTCCAATTGTGCTGAAAATTCTTTGTTGCTAGTTACTTCCAATAATGGAGTTGACACGGGGGATCCCGTTTTAGACATTGAACATGCTGATGCCTGTCCAGGGCGGCTAACTGATGGTGGTTATGAGGAAGAATTCACAGCATATTGCTTTTATGCGAAGAAAAATTATGGAAAGGGTGAGCAGGTTTTATTAAGCTATGGAACGTACACAAACTTGGAGCTTCTTGAGCATTATGGATTTCTTCTGAATGAGAACCCGAATGACAAGGTCTTTATACCCCTAGGGCTTGATGTATTTATGTCTTATTCATGGCCAGCAGATTCTCTGTACATTCAGCAAGATGGAAGACCTTCATTCTCCCTCCTATCTGCTTTGCGGTTGTGGGCAACTCCTCCAAATCAGCGGAGATCTTTCGGTCACCTTGTCTTCTCTGGGTCACAGCTATCAACAGAGAATGAGATAGCAGTAATGAAACAGATAATATCAAGTTGTCGTGCTATTCTAAAGAGTCTTCCCTCAACAGTTGAAGATGACCAATTGTTACTTTGTGCAATTGACAAGACGCACGAAATTCAGTCCTTTGATAAGCCAAATAATCTGCCTTCTGCAGTTGCAAAGGAATTCTGTGAATTTTCAGAATCAATGGGTTTGTACAGTGGAGGAAGTGACTTGGTTCCTTTGTCAACGAAGGTTTTAAGATCCATAGATAGATGGAGATCGGCAATTCAATGGCGGCTTAGGTACAAGCAGACACTTGTTCATTGCATTTCCTTTTGCTCTCGAACTATTGAGACTGTCTCCCTTCAAATTGGCTCCAAAAGGAGAAATATTCAGGGTCATAACTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31191.p1 GENE.R_Transcript_31191~~R_Transcript_31191.p1 ORF type:complete len:288 (+),score=52.16,Rubis-subs-bind|PF09273.7|3.2e-09 R_Transcript_31191:1512-2375(+)
MLFEGSNCAENSLLLVTSNNGVDTGDPVLDIEHADACPGRLTDGGYEEEFTAYCFYAKKNYGKGEQVLLSYGTYTNLELLEHYGFLLNENPNDKVFIPLGLDVFMSYSWPADSLYIQQDGRPSFSLLSALRLWATPPNQRRSFGHLVFSGSQLSTENEIAVMKQIISSCRAILKSLPSTVEDDQLLLCAIDKTHEIQSFDKPNNLPSAVAKEFCEFSESMGLYSGGSDLVPLSTKVLRSIDRWRSAIQWRLRYKQTLVHCISFCSRTIETVSLQIGSKRRNIQGHNS*

Click here to download the sequence:
Link to NCBI Protein BLAST