Transcript Information: R_Transcript_31194.p1


Annotated TAIR IDAT5G17240.1
Annotated Gene NameSET domain group 40
Annotated Gene Symbol(s)SDG40
Annotation TypeHomolog
Chromosome Positionchr5:5666854-5668849 | Forward length=491
E-Value1E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7379441432078
Replicate 22.6245375520373
Replicate 31.4725759883241
Condition 2: 8 Hour
Replicate 11.3991922826997
Replicate 20.87846321518943
Replicate 31.6855067004645
Condition 3: 24 Hour
Replicate 14.4275771082001
Replicate 21.6541444167933
Replicate 33.126814955271


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31194.p1 GENE.R_Transcript_31194~~R_Transcript_31194.p1 ORF type:complete len:280 (+),score=46.66,Rubis-subs-bind|PF09273.7|3.2e-08 R_Transcript_31194:1700-2539(+)
ATGCTATTTGAAGGTTCCAATTGTGCTGAAAATTCTTTGTTGCTAGTTACTTCCAATAATGGAGTTGACACGGGGGATCCCGTTTTAGACATTGAACATGCTGATGCCTGTCCAGGGCGGCTAACTGATGGTGGTTATGAGGAAGAATTCACAGCATATTGCTTTTATGCGAAGAAAAATTATGGAAAGGGTGAGCAGGTTTTATTAAGCTATGGAACGTACACAAACTTGGAGCTTCTTGAGCATTATGGATTTCTTCTGAATGAGAACCCGAATGACAAGGTCTTTATACCCCTAGGGCTTGATGTATTTATGTCTTATTCATGGCCAGCAGATTCTCTGTACATTCAGCAAGATGGAAGACCTTCATTCTCCCTCCTATCTGCTTTGCGGTTGTGGGCAACTCCTCCAAATCAGCGGAGATCTTTCGGTCACCTTGTCTTCTCTGGGTCACAGCTATCAACAGAGAATGAGATAGCAGTAATGAAACAGATAATATCAAGTTGTCGTGCTATTCTAAAGAGTCTTCCCTCAACAGTTGAAGATGACCAATTGTTACTTTGTGCAATTGACAAGACGCACGAAATTCAGTCCTTTGATAAGCCAAATAATCTGCCTTCTGCAGTTGCAAAGGAATTCTGTGAATTTTCAGAATCAATGGGTTTGTACAGTGGAGGAAGTGACTTGGTTCCTTTGTCAACGAAGGTTTTAAGATCCATAGATAGATGGAGATCGGCAATTCAATGGCGGCTTAGGGCATATCATGGATATCAATTGGAAGATGTTCATGGGCTACGGAGTGTAGATATCGTAAGCGCTATAACATTTACCCTGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31194.p1 GENE.R_Transcript_31194~~R_Transcript_31194.p1 ORF type:complete len:280 (+),score=46.66,Rubis-subs-bind|PF09273.7|3.2e-08 R_Transcript_31194:1700-2539(+)
MLFEGSNCAENSLLLVTSNNGVDTGDPVLDIEHADACPGRLTDGGYEEEFTAYCFYAKKNYGKGEQVLLSYGTYTNLELLEHYGFLLNENPNDKVFIPLGLDVFMSYSWPADSLYIQQDGRPSFSLLSALRLWATPPNQRRSFGHLVFSGSQLSTENEIAVMKQIISSCRAILKSLPSTVEDDQLLLCAIDKTHEIQSFDKPNNLPSAVAKEFCEFSESMGLYSGGSDLVPLSTKVLRSIDRWRSAIQWRLRAYHGYQLEDVHGLRSVDIVSAITFTLR*

Click here to download the sequence:
Link to NCBI Protein BLAST