Transcript Information: R_Transcript_31197.p1


Annotated TAIR IDAT5G17240.1
Annotated Gene NameSET domain group 40
Annotated Gene Symbol(s)SDG40
Annotation TypeHomolog
Chromosome Positionchr5:5666854-5668849 | Forward length=491
E-Value8E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4571293592891
Replicate 22.0188750400287
Replicate 32.8633421995191
Condition 2: 8 Hour
Replicate 15.2974227049329
Replicate 23.5476399074958
Replicate 32.4434860450521
Condition 3: 24 Hour
Replicate 12.869725903463
Replicate 23.9232912449585
Replicate 33.8934859298808


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31197.p1 GENE.R_Transcript_31197~~R_Transcript_31197.p1 ORF type:3prime_partial len:208 (+),score=31.32,Rubis-subs-bind|PF09273.7|1.6e-08 R_Transcript_31197:1865-2485(+)
ATGGTGGTTACGAGGAAGAGTTCGCAGCATATTGCTTTTATGCCAAGAAAAATTATGGAAAGGGTTTTATTAAGCTATGGAACGTACACAAACTTGGAGCTTCTTGAGCATTATGGATTTCTTCTGAATGAGAACCCGAACGACAAGGTCTTCATACCCCTAGGGCTCGATGTATTTATGTCCTATTCATGGCCAGCAGATTCTCTGTACATTCAGCAAGATGGAAGACCTTCATTCTCCCTCCTATCTGCTTTGCGGTTGTGGGCAACTCCTCCAAATCAGCGGAGATCTTTCGGTCACCTTGTCTTCTCTGGGTCACAGCTATCAACAGAGAATGAGATAGCAGTAATGAAACAGATAATATCAAGTTGTCGTGCTATTCTAAAGAGTCTTCCCTCAACAGTTGAAGATGACCAATTGTTACTTTGTGCAATTGACAAGACGCACGAAATTCAGTCCTTTGATAAGCCAAATAATCTGCCTTCTGCAGTTGCAAAGGAATTCTGTGAATTTTCAGAATCAATGGGTTTGTACAGTGGAGGAAGTGACTTGGTTCCTTTGTCAACGAAGGTTTTAAGATCCATAGATAGATGGAGATCGGCAATTCAATGGCGGCTTAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31197.p1 GENE.R_Transcript_31197~~R_Transcript_31197.p1 ORF type:3prime_partial len:208 (+),score=31.32,Rubis-subs-bind|PF09273.7|1.6e-08 R_Transcript_31197:1865-2485(+)
MVVTRKSSQHIAFMPRKIMERVLLSYGTYTNLELLEHYGFLLNENPNDKVFIPLGLDVFMSYSWPADSLYIQQDGRPSFSLLSALRLWATPPNQRRSFGHLVFSGSQLSTENEIAVMKQIISSCRAILKSLPSTVEDDQLLLCAIDKTHEIQSFDKPNNLPSAVAKEFCEFSESMGLYSGGSDLVPLSTKVLRSIDRWRSAIQWRLR

Click here to download the sequence:
Link to NCBI Protein BLAST