Transcript Information: R_Transcript_31202.p1


Annotated TAIR IDAT5G38600.1
Annotated Gene NameProline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15457386-15460466 | Forward length=532
E-Value1.3E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.176978971737
Replicate 216.002034783295
Replicate 317.939904525142
Condition 2: 8 Hour
Replicate 117.631407607644
Replicate 219.610999931914
Replicate 323.203515194346
Condition 3: 24 Hour
Replicate 120.84033957078
Replicate 216.844793197981
Replicate 319.443931833506


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31202.p1 GENE.R_Transcript_31202~~R_Transcript_31202.p1 ORF type:complete len:618 (+),score=146.95,PSP|PF04046.12|2.7e-10 R_Transcript_31202:308-2161(+)
ATGGAAACAGAAAAAACAATTCAACTACCGACTTGTGGTTCTGATAGTGGAAGTGATAGAGATGAAGCTCATAAGTTGAATAACGAAGTTCATGAGGCTGAGGTTGAAGATCATATGGCTAAGAGTGAAAATCAATGGCAAAGTGTGGATTGTGCTGAAATGGAAGAAGGCCAGCTTATTCAGGAGACAGAAATTTCTGGAGATGTTATAGGTGATTCATCGGATTTGCATGAGAGGGTTGATTTTGTTGGAACTTCTGAAACTCAAGTCCTGGATAACGGAGCTTTATGTACTGAGACTGGTTGCTTGGACAGTAATAATGTTGAAGAAGGGCAACTCATTCCTGAGACAGCCACCATTGTCAATGCTGTTGTTGAGAGTGTCAATTTTACTGGAGCTAGTACAAAAATTGAAGGGAATAATGCTTCTCTCAATAAGGTTGAATTTGCTGAAACTATTACAGAAATTGACGGGAAGTGTGTTGACATGCCTTCTGAGAATGGTTCCATGAGCTATGCTAAGATCGGTGGTGATTCTATATCAGGTGTTAAGAGAACACGAACTACATTTGATGAGCAGCAGCAATCTGTGCATGTCAAGTATAGTGGCTTGTCAAGACAAAGTAAACGAAAGCTTGAGGAGCTAATGCGGGAGTGGTCAAAATGGACTGCGCAAAACTGTTTCTCAGCGCAAGATCAGAATGAAGTATCTGAATCTGGTGAAGAAATATACTTTCCAGCTCTTGATATTGGCATGGGAAAGACCTCTGCAGTGTCTTTCTGGGTGGAGAATGAAATAACAAAGCCACAGAACAAGGATTTTGTCCCTGTAGAAGATGATTCTGTACCCCTTTATGATCGTGGATTTGCCTTGGGATTGGCTTCAGCTGATGGATCAAGTAATCTTCAGGGGGGTTTGGAAGTAATGGATGCCCCGCGTTGTTTCAATTGTGGTTCGTACAACCATTCTTTAAAGGAATGCCCAAAGCCTCGCGACAATGCTGCTGTTAATTTTTCTCGCAAACAGCTCAAATCAAAACGTAATCAAACAGCTGGTTCACGTAATCCCACCAGATATTATCAGGAGTCTCCCGGGGGAAAGTATGAAGGACTGAAGGCCGGTGTCCTTGATGCAGAAACAAGGCGACTTTTGAGTCTTGGGGACTTTGATCCACCTCCATGGCTTCATAGGATGCGAGAAATTGGTTATCCTCCTGGATATCTGGAGCCCGAAGATGAGGATCTGCCTTCTGGAATTACATTATATGGTGACGAGGAAATTAAAGAGGACAAGGAAGAAGGAGAAATTCTTGAAGCAGATCTTGTTGAACCAGGAAAGAAAATGACAGTGAAGTTTCCCGGCATAAATGCACCAATACCTCAGAATGGTGATGAAAGAATTTGGGCGACTAGACCTTCGAATTCAGACCGTCATCGAAACGGAGATGGTGGGCGCTCGAATTATTCTTCAAACTCTAACATTAGAGGACGTTATCGAGAGTACAACCACCGTGATTTCAATGATGATGACCCACTTGGCTTGGATCGAGCTCCAAGATATCCACGAAGGTATAATGATTATGACCTAAATTCCACATCTCGCAGTTTGAGAGAGAATGCTCCCAGACCAAGAAGTCCTACTTCTGGAAGGTTTTTTGGTGATAGAGCGAGAAATGATCCTTTGGATTCCGAAGATTCTGTAGCTTACAGTTTATATAGCTCCTTTTCATATTCCTCTAATAGGCGGGTTTCAGAGTTTGGGAATGGTTCGGATGTTGGCAGAGGCGATCACCCTGACTATTCATCAAGAAGTAGGGATAGAGAAGATAGGCATCGTCCCCGTAGTGGGCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31202.p1 GENE.R_Transcript_31202~~R_Transcript_31202.p1 ORF type:complete len:618 (+),score=146.95,PSP|PF04046.12|2.7e-10 R_Transcript_31202:308-2161(+)
METEKTIQLPTCGSDSGSDRDEAHKLNNEVHEAEVEDHMAKSENQWQSVDCAEMEEGQLIQETEISGDVIGDSSDLHERVDFVGTSETQVLDNGALCTETGCLDSNNVEEGQLIPETATIVNAVVESVNFTGASTKIEGNNASLNKVEFAETITEIDGKCVDMPSENGSMSYAKIGGDSISGVKRTRTTFDEQQQSVHVKYSGLSRQSKRKLEELMREWSKWTAQNCFSAQDQNEVSESGEEIYFPALDIGMGKTSAVSFWVENEITKPQNKDFVPVEDDSVPLYDRGFALGLASADGSSNLQGGLEVMDAPRCFNCGSYNHSLKECPKPRDNAAVNFSRKQLKSKRNQTAGSRNPTRYYQESPGGKYEGLKAGVLDAETRRLLSLGDFDPPPWLHRMREIGYPPGYLEPEDEDLPSGITLYGDEEIKEDKEEGEILEADLVEPGKKMTVKFPGINAPIPQNGDERIWATRPSNSDRHRNGDGGRSNYSSNSNIRGRYREYNHRDFNDDDPLGLDRAPRYPRRYNDYDLNSTSRSLRENAPRPRSPTSGRFFGDRARNDPLDSEDSVAYSLYSSFSYSSNRRVSEFGNGSDVGRGDHPDYSSRSRDREDRHRPRSGR*

Click here to download the sequence:
Link to NCBI Protein BLAST