Transcript Information: R_Transcript_31271.p1


Annotated TAIR IDAT1G48200.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17797070-17797852 | Reverse length=118
E-Value2.8E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.131033941978
Replicate 223.342945756943
Replicate 325.332156871039
Condition 2: 8 Hour
Replicate 118.724484959658
Replicate 218.414843869212
Replicate 324.024190526983
Condition 3: 24 Hour
Replicate 116.475602833999
Replicate 220.23894345253
Replicate 320.21393903437


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31271.p1 GENE.R_Transcript_31271~~R_Transcript_31271.p1 ORF type:5prime_partial len:170 (+),score=20.75 R_Transcript_31271:1-510(+)
TTCAGTTTACCTCTAAATAACAGATTTATTTTGGGACACAGGAGTATCACTTATCCCTTAAAAACCATTCTGGATTCCCCTTCTTCTCACTTGTTCCAGTACTGCACTGCTGTTCTGTGTCAGCAATTCATACTGAAGAAGAAGCGAGAAAGTTCAAAGATGGAAGTTGCAGGGAGAGCAATGAACCTGATAAACAGGTTAATCAACAGCAACGTCTTCATCGACATATGTTTAGTAGGTTCCTTTGCTGCTCTAGGTTTAAGATCCATGTACCAAGAGAAACTCATCGAAACCCTAGAATCCGAAAAGCAAACCCTAACTCAAACCAATAAAACCATGAAGAAGACCCTTTGGGATTGGAAACAGCAGCTCTACGCTGAAGCCTCTTCTCCTGATACCGCCATTGTTCCCCTCTCTTGCCTCAAGGCCATCTATGGCGAAGTTGTTTCCGTTCCTTCCGCTGAAAATGTGAAGAAAGAGGGCAAAAGATCAGCTAAAATCGTTATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31271.p1 GENE.R_Transcript_31271~~R_Transcript_31271.p1 ORF type:5prime_partial len:170 (+),score=20.75 R_Transcript_31271:1-510(+)
FSLPLNNRFILGHRSITYPLKTILDSPSSHLFQYCTAVLCQQFILKKKRESSKMEVAGRAMNLINRLINSNVFIDICLVGSFAALGLRSMYQEKLIETLESEKQTLTQTNKTMKKTLWDWKQQLYAEASSPDTAIVPLSCLKAIYGEVVSVPSAENVKKEGKRSAKIVI*

Click here to download the sequence:
Link to NCBI Protein BLAST