Transcript Information: R_Transcript_312749.p1


Annotated TAIR IDAT2G27940.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11897963-11898742 | Forward length=237
E-Value4.1E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1474071711434
Replicate 22.9112517383943
Replicate 32.4061699155622
Condition 2: 8 Hour
Replicate 12.2633992808378
Replicate 22.724645266363
Replicate 32.4405526884554
Condition 3: 24 Hour
Replicate 11.2539978737822
Replicate 23.8921045101019
Replicate 31.8393029148653


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_312749.p1 GENE.R_Transcript_312749~~R_Transcript_312749.p1 ORF type:5prime_partial len:238 (+),score=9.64,zf-RING_2|PF13639.2|1.5e-14,zf-RING_11|PF17123.1|7e-10,zf-rbx1|PF12678.3|5.4e-08,zf-C3HC4|PF00097.21|1.6e-08,zf-C3HC4_2|PF13923.2|7.3e-07 R_Transcript_312749:1-714(+)
CACCCCCTCACACCCCAAATTTCCTCTCCAATATCATCATCAAAGTTCGCAGAAGCTGAAGCTCAAAATCTCAACACGAACTACAGCTCAACTTGCTGTTACAACAGCTTAAAACTAACCCCACCTTTTGACTCAGCAATGGCGTTAACCGTTCTAGTACTTTTAACGGCTCTCTTCTTTATGGGCTTCTTTTCCATCTACATTCGCCGTTTCGATGACGAATCCTCCATCGACCCCACGCGCCGCCGTCGCGTGTCGACGGGAACGTCGGAGTCTTCGTACTTGGGGAGCTCTAAGGGGAAGGGGGTTGACCCCACCACGATAGAGTCACTGCCGGTGTACGTTTACGACGGTGGGGATGCGAAGCAGGGGATTGATAAGGTGGAATGTGCAATTTGTTTGAGCGAGTTCGAGGAGAGAGAGTGGGTGAAGGAGATTCCGTACTGTGGTCACGTGTTCCACGTGGAGTGTATCGACACGTGGCTCTCTAGTCACGTGACGTGTCCTCTTTGTCGGACGGAGAAGCTCTTCCGTCACGTGGCGGGTGAGCAGAAGGTGGAGGTCGAGGAGGGATTCGGTGTGAGTGAAGTGCTGGATAGTGGTGTGAGGGAGGTGAGATTGACGGTGGATTTTGGTGACACGTGGAATGGTGGACAGAGTAGAGATGTGGGGCCATTGGGTGTGCGAACTTTGCATCGATCATTGAGTTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_312749.p1 GENE.R_Transcript_312749~~R_Transcript_312749.p1 ORF type:5prime_partial len:238 (+),score=9.64,zf-RING_2|PF13639.2|1.5e-14,zf-RING_11|PF17123.1|7e-10,zf-rbx1|PF12678.3|5.4e-08,zf-C3HC4|PF00097.21|1.6e-08,zf-C3HC4_2|PF13923.2|7.3e-07 R_Transcript_312749:1-714(+)
HPLTPQISSPISSSKFAEAEAQNLNTNYSSTCCYNSLKLTPPFDSAMALTVLVLLTALFFMGFFSIYIRRFDDESSIDPTRRRRVSTGTSESSYLGSSKGKGVDPTTIESLPVYVYDGGDAKQGIDKVECAICLSEFEEREWVKEIPYCGHVFHVECIDTWLSSHVTCPLCRTEKLFRHVAGEQKVEVEEGFGVSEVLDSGVREVRLTVDFGDTWNGGQSRDVGPLGVRTLHRSLSF*

Click here to download the sequence:
Link to NCBI Protein BLAST