Transcript Information: R_Transcript_312857.p1


Annotated TAIR IDAT5G44400.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17886365-17888071 | Reverse length=537
E-Value2E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13372132567559
Replicate 20.19227381333606
Replicate 30.08390746372217
Condition 2: 8 Hour
Replicate 10.13453771949036
Replicate 20.081907992092255
Replicate 30.29920237286352
Condition 3: 24 Hour
Replicate 10.25228359590884
Replicate 20.32315397641872
Replicate 30.20043685610712


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_312857.p1 GENE.R_Transcript_312857~~R_Transcript_312857.p1 ORF type:5prime_partial len:546 (+),score=39.83,FAD_binding_4|PF01565.19|7.4e-23,BBE|PF08031.8|5.9e-20 R_Transcript_312857:2-1639(+)
TTCATGCAAATGGCGAACTACTTCTTAGAGCTTAAACTCACATATATATTCATATATTCATTTTTTGTTCCATTTTCACTTTCTCAACCCCTACATGTGATCACTTCATGCTTGATTCATAACCATGTCACTAATTTTTTTCTGTTTCCGACCTCACAATATCACAACATTCTCTTTTTTTCTCTTCAAAATCTCCGTTTTGCAAACCCTAAATACCCAAAGCCTTCCATAATAATCCTCCCAAATAGCAAAGAACAACTTGTAAGTAGTTATATTTGCTCTAAGAAAGGAGCATATGAGGTCAAAATTAGGAGTGGTGGTCATAGCTATGAGGGACTTTCATCGATCTCAAATGATAGAAAACCATTTGTTATTATTGATTTGATGAATTTAAATAAAGTTTTGGTAGACTTAAGATCAAAAACAGCTTGGGTTGAAAGTGGGGCTACTGTTGGTCAAGTCTACTATACCATAGCTAAGCAACCTAAAGGAGAATATGGATTCTCAGCTGGGTCATGCCCAACCGTTGGATTTGGGGGCCACCTTTCGGGTGGCGGGTTCGGGTTGTTGTCTAGGAAATATGGGCTTGGGGCGGATAACGTAGTGGATGCCCTCATGGTGGACGCGAAAGGCCGGCTATTGGACCGGGCCACCATGGGGGAGGATGTTTATTGGGCCGTCCGTGGTGGAGGTGGGGGTAGTTTTGGAATTATCTATGCATGGAAGATTAAGTTGTTGAAAGTTCCTCCAAGAGTTGCTTCCTTCCAAGCCACAAGACAAGGTACAGTTGAGAACATATCTCAGTTGGTACACAAATGGCAATATGTTGGACCACACCTAAACGACATGTTTTACTTGTCGGTCTCTATAGGAGCTAATAACGGTGGAAACGGTAATAATAGCATCTTTGCTACATTCAATGGTTTCTACCTAGGACAAATATTTGAAGCTATTTCCATAATTAGTAAGGATTTTCCAGAGCTAAGAATCATGGAAAATGAATGCAAGGAAACGAATTGGATCGAGTCTGTTTTGTACTTCTCTGGCCTTAATGAAACAAGCATAATAAGTGACCTGAAGAACCGATATCTCAAAAGTAAGAATTACTTCAAAGCAAAATCGGACTATGTAAGAACACCTATTCCCACAGATGGCTTAAGAGGTGTTATGAACTATCTCACCAAAGAGCCTAAGGGTTACATTATTATGGACCCTTATGGTGGTCAAATGGCTCGAATAGACAAAGACTCGATACCGTTTCCTCATAGAAAGGGAAACCTTTATAGCATTCAATATTTAGTGTCTTGGAACAAAGAGGATGACACTAATTATAATAGAGATCAATATTTAGATTGGATTAGGGAATTTTACGATTTCATGGAACCCTTTGTTTCCTCTAATCCACGAGCCGCTTATGTCAACTACTTGGATCTTGATATTGGAGGGAGAAATAGCAACGACGATTATTCTTACGATGCTGTAGAAAAAGGTCGTGTTTGGGGCAGAAAGTACTTCCTTGGCAACTATGATAGACTGGTCAAGGCTAAGACCATCATTGATCCGTGCAATGTGTTCCGTCATCCACAGGGAATTGCTCCAAAGTCATCGGATAGAGTCAAACACTGTAGCTTCTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_312857.p1 GENE.R_Transcript_312857~~R_Transcript_312857.p1 ORF type:5prime_partial len:546 (+),score=39.83,FAD_binding_4|PF01565.19|7.4e-23,BBE|PF08031.8|5.9e-20 R_Transcript_312857:2-1639(+)
FMQMANYFLELKLTYIFIYSFFVPFSLSQPLHVITSCLIHNHVTNFFLFPTSQYHNILFFSLQNLRFANPKYPKPSIIILPNSKEQLVSSYICSKKGAYEVKIRSGGHSYEGLSSISNDRKPFVIIDLMNLNKVLVDLRSKTAWVESGATVGQVYYTIAKQPKGEYGFSAGSCPTVGFGGHLSGGGFGLLSRKYGLGADNVVDALMVDAKGRLLDRATMGEDVYWAVRGGGGGSFGIIYAWKIKLLKVPPRVASFQATRQGTVENISQLVHKWQYVGPHLNDMFYLSVSIGANNGGNGNNSIFATFNGFYLGQIFEAISIISKDFPELRIMENECKETNWIESVLYFSGLNETSIISDLKNRYLKSKNYFKAKSDYVRTPIPTDGLRGVMNYLTKEPKGYIIMDPYGGQMARIDKDSIPFPHRKGNLYSIQYLVSWNKEDDTNYNRDQYLDWIREFYDFMEPFVSSNPRAAYVNYLDLDIGGRNSNDDYSYDAVEKGRVWGRKYFLGNYDRLVKAKTIIDPCNVFRHPQGIAPKSSDRVKHCSFF*

Click here to download the sequence:
Link to NCBI Protein BLAST