Transcript Information: R_Transcript_312858.p1


Annotated TAIR IDAT5G44380.1
Annotated Gene NameFAD-binding Berberine family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17878873-17881369 | Reverse length=541
E-Value3E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.5650584218595
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.6786233504793
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_312858.p1 GENE.R_Transcript_312858~~R_Transcript_312858.p1 ORF type:5prime_partial len:130 (+),score=8.02,BBE|PF08031.8|9.4e+03,BBE|PF08031.8|7e-21 R_Transcript_312858:3-392(+)
TCGATAGCGTTTCCTCATAGGAAGGGAAACCTCTATGGCATTCAATATCTGGTATCTTGGAACAAAGAGGACGATACTAATTATAATAGAGATCAATATTTAGATTGGATTAGGGAATTTTACGATTTCATGGAACCCTTTGTTTCCTCTAATCCTCGAGCCGCTTATGTTAACTACTTGGATCTTGATCTTGGAGGGAGAAATAGCGACGATGATTATTCTTACCATGCTGTGGAAAAAGGTCGTATTTGGGGCAAAAAGTACTTCCTTGGCAACTATGATAGACTGGTCAAGGCTAAGACCATCATTGATCCGTGCAATGTGTTCCGTCATCCACAGGGAATTGCTCCAAAGTCATCGGATAGAGTCAAACACTGTAGCTTCTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_312858.p1 GENE.R_Transcript_312858~~R_Transcript_312858.p1 ORF type:5prime_partial len:130 (+),score=8.02,BBE|PF08031.8|9.4e+03,BBE|PF08031.8|7e-21 R_Transcript_312858:3-392(+)
SIAFPHRKGNLYGIQYLVSWNKEDDTNYNRDQYLDWIREFYDFMEPFVSSNPRAAYVNYLDLDLGGRNSDDDYSYHAVEKGRIWGKKYFLGNYDRLVKAKTIIDPCNVFRHPQGIAPKSSDRVKHCSFF*

Click here to download the sequence:
Link to NCBI Protein BLAST