Transcript Information: R_Transcript_3129.p1


Annotated TAIR IDAT5G53120.6
Annotated Gene Namespermidine synthase 3
Annotated Gene Symbol(s)SPDS3
Annotation TypeOrtholog
Chromosome Positionchr5:21535429-21537653 | Forward length=386
E-Value5.3E-200
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 152.21543748522
Replicate 243.943076827553
Replicate 345.938648621792
Condition 2: 8 Hour
Replicate 153.320312467089
Replicate 264.699928606053
Replicate 375.730900047352
Condition 3: 24 Hour
Replicate 167.49344419948
Replicate 259.838448301484
Replicate 369.131657426375


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3129.p1 GENE.R_Transcript_3129~~R_Transcript_3129.p1 ORF type:complete len:366 (+),score=83.96,Spermine_synth|PF01564.13|7.2e-86 R_Transcript_3129:991-2088(+)
ATGGAGGGCGGCGCAGGAAGAGGTTTGGAATGCCAGAAGATTATGGATGGGAAGGCGAGTGATGGCAAGGAGAAGGCAATCCCGTCTTGCTGTTTAAAGGCTAGAGTCTCCATCCCTGAGTCCGATGCTAAATGCCATTCTACTGTGGTTTCTGGGTGGTTTTCGGAACTCAAATTGTCCAATGACCAAACTGGGAAGCAGCTTTATTACAACAATCCAATGTGGCCTGGAGAAGCACATTCCATGAGAGTGGAGGAGATATTGTTTCAGGAAAGGTCAAAGTACCAAGAAGTCCTTGTTTTTAAGTCATCAACCTATGGGAATGTACTCGTGCTTGATGGCATCGTTCAATTGACTGAAAAAGATGAATGCGCATACCAGGAGATGATAACTCATCTTCCACTCTGTTCAATTGAATCCCCGAAAAATGTCCTGGTAGTAGGTGGTGGTGATGGTGGAGTTCTGCGAGAAATTTCTCGTCATACCTCCGTGGAGAACATAGAGATTTGTGAAATTGATGAGATGGTTATAGAGGTCTCTAAGAAGTTCTTTCCAGAGTTGGCTCTTGGATTTGAAGATCCTCGTGTCCATCTTCACATTGGTGATGCTGCTGAGTTCCTGAGGAGTGCGCGAGCAGGGAAATATGATGCCATAGTTGTGGATTCTTCAGACCCTGTAGGTCCAGCCGTAGAGCTTGTTGAGAAGCCCTTCTTTGAGACAGCAGCCAAAGCATTGAGGCCTGGTGGTGTGCTTTGTAACATGGCGGAGAGTATGTGGCTCCACACCCATCTTATTGACGATATGATATCTGTTTGCCGTGAAACTTTCAAGCAAGTTCGTTATGCATGGACTAGTGTACCTACTTATCCAAGTGGTGTCATTGGGTTTCTGGTTTGCTCAACAGAGGGGGCACCAGTAGACTTTCTCAATCCAATTAACCCTATTGAGAAGATAGAAGGAGCTCTCAAGCATCGGAGAGAACTTAGGTTTTATAACTCTGAGCTCCACACTGCTGCCTTTGCACTGCCTACATTTGTGAAGCGGGAGGTCCGTTCCCTCTGTGGTTCCCCTTCTACCAATGGAGTTCAAGTCTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3129.p1 GENE.R_Transcript_3129~~R_Transcript_3129.p1 ORF type:complete len:366 (+),score=83.96,Spermine_synth|PF01564.13|7.2e-86 R_Transcript_3129:991-2088(+)
MEGGAGRGLECQKIMDGKASDGKEKAIPSCCLKARVSIPESDAKCHSTVVSGWFSELKLSNDQTGKQLYYNNPMWPGEAHSMRVEEILFQERSKYQEVLVFKSSTYGNVLVLDGIVQLTEKDECAYQEMITHLPLCSIESPKNVLVVGGGDGGVLREISRHTSVENIEICEIDEMVIEVSKKFFPELALGFEDPRVHLHIGDAAEFLRSARAGKYDAIVVDSSDPVGPAVELVEKPFFETAAKALRPGGVLCNMAESMWLHTHLIDDMISVCRETFKQVRYAWTSVPTYPSGVIGFLVCSTEGAPVDFLNPINPIEKIEGALKHRRELRFYNSELHTAAFALPTFVKREVRSLCGSPSTNGVQVS*

Click here to download the sequence:
Link to NCBI Protein BLAST