Transcript Information: R_Transcript_313213.p1


Annotated TAIR IDAT1G08190.1
Annotated Gene Namevacuolar protein sorting 41
Annotated Gene Symbol(s)ATVPS41, ZIP2, VPS41, ATVAM2, VAM2
Annotation TypeHomolog
Chromosome Positionchr1:2567652-2573142 | Forward length=980
E-Value5E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9657034874313
Replicate 21.2920800256183
Replicate 33.3479078025146
Condition 2: 8 Hour
Replicate 11.506822458292
Replicate 23.9561560180559
Replicate 33.2114388020685
Condition 3: 24 Hour
Replicate 11.7659851713618
Replicate 21.5269025385784
Replicate 32.0204035095597


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_313213.p1 GENE.R_Transcript_313213~~R_Transcript_313213.p1 ORF type:internal len:130 (-),score=20.72 R_Transcript_313213:1-387(-)
CACCGGAGTCCGATCCAAATGTCCCCATTCCCGACGGCAAACGGCGTCGACGAGCGAGAAGAACCAGAACTATACGACGACGATGAATTCTCTCACGACGAAGATGAAGATGACGATGACGAAGAAGAAGATGAGCCGAAGCTCAAGTACCAGAGAATGGGAGGGAGTTTGTCTTCTTTATTGACCACTGATGCTGCCTCTTGTATTTCCGTCTCTGAACGAATGATCGCTCTTGGTACTCACGTTGGTACCGTTCACATACTGGATTTCCTCGGCAATCAGATTAAGGAATTCCCTGCACACAAAGCGGCTGTCAATGGCCTTAGCTTTGACATAGATGGTGAATTTATTGGAAGTTGCTCAGATGATGGATCAGTTGTTATAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_313213.p1 GENE.R_Transcript_313213~~R_Transcript_313213.p1 ORF type:internal len:130 (-),score=20.72 R_Transcript_313213:1-387(-)
HRSPIQMSPFPTANGVDEREEPELYDDDEFSHDEDEDDDDEEEDEPKLKYQRMGGSLSSLLTTDAASCISVSERMIALGTHVGTVHILDFLGNQIKEFPAHKAAVNGLSFDIDGEFIGSCSDDGSVVIN

Click here to download the sequence:
Link to NCBI Protein BLAST