Transcript Information: R_Transcript_313858.p1


Annotated TAIR IDAT5G24880.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8552743-8554074 | Forward length=443
E-Value1.2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.555479040228
Replicate 222.961471391222
Replicate 316.136273282019
Condition 2: 8 Hour
Replicate 16.7547213647573
Replicate 210.574604220462
Replicate 36.4380096781668
Condition 3: 24 Hour
Replicate 14.2975205647919
Replicate 27.9312014729662
Replicate 36.3614511158963


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_313858.p1 GENE.R_Transcript_313858~~R_Transcript_313858.p1 ORF type:3prime_partial len:203 (-),score=82.74,CaM_binding|PF07839.7|6.1e+03,CaM_binding|PF07839.7|1.7e-11 R_Transcript_313858:1-555(-)
ATGGCTGCTGATCAGGTTTCTGAAGAGTCTGCAACACAGGAGATCAGAGCTTCTGAACACCACCATGAAGTGAAAGAAGAGGTGAGAGATCCATATCAGGAGAGCATTGGAGATTCGGGTGATCATCAGCCTGAAGTCGAGACTGCAGAACAGAATCAGACAGGGGAGATCAGTGCAGGTAACGAGGAAGGGGTTGATCAAGAGGCGACAAAGGTGGACACCACTGAAACTGAGGAAAAGAAAGAAAGTGAGTCGTCAGAGAAAGAGGGGGATGACGACACAGTTAGGGAAGACGAATCAGAAGCTAAGGATGAAAAAGAAAAAGAAAAGGAAAAGGAAAAACAGAATGTTGCAAGTCCTCCTGCTGCAAGTTCTGCACCTGCAACTGTATCTGCACCTGTGAAAGCGCAAACTCCTGCAGGGAAGAAAGAAAATGCAGCCTACAATGATGTGATTGAAGAAACCGCGACTAAGCTGATGAGCAGGAAGAACAAGGTGCTTGCACTTGCCGGAGCTTTTGAAACCGTCATCTCCTTGCAAGACACCAGCAAGAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_313858.p1 GENE.R_Transcript_313858~~R_Transcript_313858.p1 ORF type:3prime_partial len:203 (-),score=82.74,CaM_binding|PF07839.7|6.1e+03,CaM_binding|PF07839.7|1.7e-11 R_Transcript_313858:1-555(-)
MAADQVSEESATQEIRASEHHHEVKEEVRDPYQESIGDSGDHQPEVETAEQNQTGEISAGNEEGVDQEATKVDTTETEEKKESESSEKEGDDDTVREDESEAKDEKEKEKEKEKQNVASPPAASSAPATVSAPVKAQTPAGKKENAAYNDVIEETATKLMSRKNKVLALAGAFETVISLQDTSKN

Click here to download the sequence:
Link to NCBI Protein BLAST