Transcript Information: R_Transcript_31400.p1


Annotated TAIR IDAT1G80400.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30225864-30227360 | Forward length=407
E-Value1E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.32818313064
Replicate 26.0556705692396
Replicate 37.4189670228673
Condition 2: 8 Hour
Replicate 16.3095964048457
Replicate 26.2906499742342
Replicate 38.5823218063295
Condition 3: 24 Hour
Replicate 17.3812335294746
Replicate 26.6217916763672
Replicate 38.6929890955053


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31400.p1 GENE.R_Transcript_31400~~R_Transcript_31400.p1 ORF type:complete len:423 (+),score=48.85,zf-RING_2|PF13639.2|1.1e+03,zf-RING_2|PF13639.2|1.2e-12,zf-RING_11|PF17123.1|4.5e+03,zf-RING_11|PF17123.1|6.6e-09,zf-C3HC4|PF00097.21|1.6e+03,zf-C3HC4|PF00097.21|2.1e-06,zf-rbx1|PF12678.3|1.9e-05 R_Transcript_31400:465-1733(+)
ATGGAGCGGCTGGCTGATCTTAATGGCCATCAGCATGTCATTGACATTGCTGTGGCCAATGATGCTCCATCAGGTTCCTCAAATAGTGATCGTGTACATCAGACAGAGTCACATCATAATGTAGATAGATCATCAAGTATTAGTACAGAAGTTCACCTGCCGCAAGTTTCACTGTCTTCCCCAAATAGAGTGAACTCCAGAAATTCTTCGTTTGTGGGCAGAGGTGAAGCATACACCAGCCCTTTGAATTCTGGCCTGTGGATATCAGTTGAGCTAATTGTCACCTTGGCTCAAATTGTTGCTTCTGTTGTTATTTTGTCACTTTCAAGATATAAGAGTAGTGAAGCTCCATTATTTGCATGGGTTGTGGGTTATGCATGTGGATGTCTAGCAACACTTCCAATTCTGTACTGGCGTCTTCGAAATTGTATCCAGGGTCCTGAACGACATTCATTTCAATCACACCAGAGCTCTTCAGGGGCCATGACTTCGTTCGAAACTAATACTTCCTCATCAATATCCATCATTCAAGAAGGAGAGAGCAGCCATCCAAATTCACATGTAATAGCCAGAAACAATGGGACGAGAGGACGAATTAGTGTAAGATTCAATGGAATCGTGGACCACTTCAAGATGGCCTTGGACTGCTTCTTTGCAGTGTGGTTTGTCGTGGGTAATGTATGGATTTTTGGGGCGCACTCCTCCCCATCTGTTGCTCCAAAGTTGTACAGGTTATGTATAGTTTTCCTTACTTTCAGCTGTATTGGGTATGCCTTACCGTTCCTACTGTGCGCTACAATATTTTGCTGCTTGCCTTGTATTATCTCAGTGCTGGGCATTAGAGAGGAGATCTCAAAAACGAGAGGAGCAACTACTGAATCCATTAATGCTTTGCCTACCTACAAGTGCAAGCTTTCCAAAAATGAGAGTGCTGATGATGAACAAATCTGCTTGAGCGCTAGTAAAAGTGGAGTCTCAGGTCATGGGGCTCAGGAGCGCATCATATCCCCAGAAGATGCGGTATGTTGTATTTGCTTGGCAGCCTATCTCGATAATGACGAGCTAAGAGAGCTGCCTTGCTCCCATCTTTTCCACAGTGAGTGTGTCGACAAATGGTTGAAGATGAACGCGTTATGTCCCCTGTGCAAGCTGGAGGTTGGTATCTGTGATGGCAGTAGGGCCCCATCTTCGGCGTCGAGCATTAGACAACGAGATAATAATATCAATGATGAAATTGAGGGCAGTTTTACTCGCAGCAGTAATTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31400.p1 GENE.R_Transcript_31400~~R_Transcript_31400.p1 ORF type:complete len:423 (+),score=48.85,zf-RING_2|PF13639.2|1.1e+03,zf-RING_2|PF13639.2|1.2e-12,zf-RING_11|PF17123.1|4.5e+03,zf-RING_11|PF17123.1|6.6e-09,zf-C3HC4|PF00097.21|1.6e+03,zf-C3HC4|PF00097.21|2.1e-06,zf-rbx1|PF12678.3|1.9e-05 R_Transcript_31400:465-1733(+)
MERLADLNGHQHVIDIAVANDAPSGSSNSDRVHQTESHHNVDRSSSISTEVHLPQVSLSSPNRVNSRNSSFVGRGEAYTSPLNSGLWISVELIVTLAQIVASVVILSLSRYKSSEAPLFAWVVGYACGCLATLPILYWRLRNCIQGPERHSFQSHQSSSGAMTSFETNTSSSISIIQEGESSHPNSHVIARNNGTRGRISVRFNGIVDHFKMALDCFFAVWFVVGNVWIFGAHSSPSVAPKLYRLCIVFLTFSCIGYALPFLLCATIFCCLPCIISVLGIREEISKTRGATTESINALPTYKCKLSKNESADDEQICLSASKSGVSGHGAQERIISPEDAVCCICLAAYLDNDELRELPCSHLFHSECVDKWLKMNALCPLCKLEVGICDGSRAPSSASSIRQRDNNINDEIEGSFTRSSNL*

Click here to download the sequence:
Link to NCBI Protein BLAST