Transcript Information: R_Transcript_31403.p1


Annotated TAIR IDAT1G80400.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30225864-30227360 | Forward length=407
E-Value1E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7953242002864
Replicate 27.8425897536054
Replicate 38.0688035504178
Condition 2: 8 Hour
Replicate 17.8146377491208
Replicate 29.9381697071936
Replicate 310.1700513405
Condition 3: 24 Hour
Replicate 19.0094468080352
Replicate 28.1859944345642
Replicate 310.659260438536


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_31403.p1 GENE.R_Transcript_31403~~R_Transcript_31403.p1 ORF type:complete len:423 (+),score=53.47,zf-RING_2|PF13639.2|1.1e+03,zf-RING_2|PF13639.2|1.3e-12,zf-RING_11|PF17123.1|4.5e+03,zf-RING_11|PF17123.1|4.1e-09,zf-C3HC4|PF00097.21|1.6e+03,zf-C3HC4|PF00097.21|1.2e-06,zf-rbx1|PF12678.3|1.5e-05 R_Transcript_31403:468-1736(+)
ATGGAGCGGCTGGCTGATCTTAATGGCCATCAGCATGTCATTGACATTGCTGTGACCAATGATGCTCCATCAGGTTCATCAAATAGCAATGGTGTACATCAGACTGAGTCATATCATAATGTAGATAGATCATTAAGCAGTATTACAGAAGTTCACCTTCCGCAAGTTTCACTTTCTTCCCCAAATAGAGTAAACTCCAGAAACTCTTCGTTTGTGGGCAGAGGTGAAGCATACACCAGCCCTTTGAATTCTGGCCTGTGGATATCAGTTGAGCTAATTGTCACCTTGGCTCAAATTGTTGCTTCTGTTGTTATTTTGTCACTTTCAAGATATAAGAGTAGTGAAGCTCCATTATTTGCATGGGTTGTGGGTTATGCATGTGGATGTCTAGCAACACTTCCAATTCTGTACTGGCGTCTTCGAAATTGTATCCAGGGTCCTGAACGACATTCATTTCAATCACACCAGAGCTCTTCAGGGGCCATGACTTCGTTCGAAACTAATGCTTCCTCATCAATATCCAACATTCAAGGAGGAGAGAGCAGCCATCAAAATTCACCTGTAATTGCCAGAAACAATTGGACGAGAGGACCAATTAGTGTAAGATTCAGTGGAATCGTGGACCACTTTAAGATGGCCTTGGACTGTTTCTTTGCAGTGTGGTTTGTTGTGGGTAATGTATGGATTTTTGGGGCGCACTCCTCCCCATCTGTTGCTCCAAAGTTGTACAGGTTATGTATAGTTTTCCTTACTTTCAGCTGTATTGGGTATGCCTTACCGTTCCTACTGTGCGCTACAATATTTTGCTGCTTGCCTTGTATTATCTCAGTGCTGGGCATTAGAGAGGAGATCTCAAAAACGAGAGGAGCAACTACTGAATCCATCAATGCTTTACCTACCTACAAGTGTAAGCTATCCAAAAATGAGAGTGCTGATGATGAACAAATCTGCTTGAGCGCTAGTAAAAGTGGAGTCTCAGGTCATGGGGCTCAGGAGCGCATCATATCCCCAGAAGATGCGGTATGTTGTATTTGCTTGGCAGCCTATCTTGACAATGACGAGCTAAGGGAGCTGCCTTGCTCCCATCTCTTCCACAGTGATTGTGTTGACAAATGGTTGAAGATGAACGCGTTATGTCCTCTGTGCAAACTGGAGGTTGGTAGCTGTGAAGGCAGTAGGGTCCCATCTTTGTCGTCGAGCATTAGACGACGAGATGATAATATCAATGATGAAATTGAGGGCAGTTTTACTCGGAGCAGTATTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_31403.p1 GENE.R_Transcript_31403~~R_Transcript_31403.p1 ORF type:complete len:423 (+),score=53.47,zf-RING_2|PF13639.2|1.1e+03,zf-RING_2|PF13639.2|1.3e-12,zf-RING_11|PF17123.1|4.5e+03,zf-RING_11|PF17123.1|4.1e-09,zf-C3HC4|PF00097.21|1.6e+03,zf-C3HC4|PF00097.21|1.2e-06,zf-rbx1|PF12678.3|1.5e-05 R_Transcript_31403:468-1736(+)
MERLADLNGHQHVIDIAVTNDAPSGSSNSNGVHQTESYHNVDRSLSSITEVHLPQVSLSSPNRVNSRNSSFVGRGEAYTSPLNSGLWISVELIVTLAQIVASVVILSLSRYKSSEAPLFAWVVGYACGCLATLPILYWRLRNCIQGPERHSFQSHQSSSGAMTSFETNASSSISNIQGGESSHQNSPVIARNNWTRGPISVRFSGIVDHFKMALDCFFAVWFVVGNVWIFGAHSSPSVAPKLYRLCIVFLTFSCIGYALPFLLCATIFCCLPCIISVLGIREEISKTRGATTESINALPTYKCKLSKNESADDEQICLSASKSGVSGHGAQERIISPEDAVCCICLAAYLDNDELRELPCSHLFHSDCVDKWLKMNALCPLCKLEVGSCEGSRVPSLSSSIRRRDDNINDEIEGSFTRSSIL*

Click here to download the sequence:
Link to NCBI Protein BLAST