Transcript Information: R_Transcript_314376.p1


Annotated TAIR IDAT4G04480.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has 78 Blast hits to 78 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2229649-2230845 | Forward length=398
E-Value6E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.057945907792758
Replicate 20.133309843913
Replicate 30.21815940567764
Condition 2: 8 Hour
Replicate 10.46639742756657
Replicate 20.35493463239977
Replicate 30.11524832139928
Condition 3: 24 Hour
Replicate 10.43729156624198
Replicate 20
Replicate 30.2084543303514


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_314376.p1 GENE.R_Transcript_314376~~R_Transcript_314376.p1 ORF type:internal len:315 (+),score=66.15,Chloroplast_duf|PF14476.2|4.8e-83 R_Transcript_314376:3-944(+)
CAACCAACTTCCACCATTCTCACCAACACCAAGCTGAGAACTTTTTTACAAATACATAAAAATTGCATAATTATGGCTTCCTTACAAGCTTTATTACCAACTAGAACCCATAAATCCATGACAAATCTTGTAAACCCTCCAAAGAAATTACAAATTTTGAGTGCAATTCGTGTCCCAAGACTCCCAACAAAACAAGCTCAGAAACAACAGCTTGTGTTTATTGAGCTTGATAAGAATGATTCATCTCCAACATCAATGACCATCAAGGATAATGCGAGACTGAAGCTATCAACAATACTGGAGTTTGTAAATGATGGAATAGAGATGCACCACAACATAGGGGAGCAACGGCAGAATTGGAACTCCTTGTTGCTCAACTCCCTCAACATGATCTCTCTTACGGCCACCGCCATGGCTGGAATTGCAGGAGCTCTTGAGACACCTGCTTTGCCTTTGAAGATATCTTCTTTTTTGCTCTTCTCCGCAGCTGCAGGGATTCTTATGGTAATGAATAAGATTCAGCCGTCTCAGCTTGTGGAGGAGCAAAGGTGCGCAGTTAGGCTGTTGAAGAAGCTCAAGAACAGGGTTGAGACCACATTGGCTCTTAATACTACTCTCACTGAAAAAGAAATTGAGGGTGTAATAGACAATCTTTTAGCCATCGACAGGGGGTATCCTCTGCCTCTGTTGGGGGCTATGCTCGAGAAATTCCCAGAGACCTTCAAGCCCGCCGTCTGGTGGGGCCAACAGAAGTCGAAGAAATCCACTTCATCATCACCGAGAGGGTTTAAGTCATCAATGCAATATGTCAATGGGGAGAAGGTGAATGGGTGGAGTGAGGGGTTGGAAGAGGATATGAAGGAAATTGTGGGGGTCATACAAAGTAAGGACATGGAAGATTATGATAGATTAGGGAACAAGGCATTGGTGCTGAACAAGACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_314376.p1 GENE.R_Transcript_314376~~R_Transcript_314376.p1 ORF type:internal len:315 (+),score=66.15,Chloroplast_duf|PF14476.2|4.8e-83 R_Transcript_314376:3-944(+)
QPTSTILTNTKLRTFLQIHKNCIIMASLQALLPTRTHKSMTNLVNPPKKLQILSAIRVPRLPTKQAQKQQLVFIELDKNDSSPTSMTIKDNARLKLSTILEFVNDGIEMHHNIGEQRQNWNSLLLNSLNMISLTATAMAGIAGALETPALPLKISSFLLFSAAAGILMVMNKIQPSQLVEEQRCAVRLLKKLKNRVETTLALNTTLTEKEIEGVIDNLLAIDRGYPLPLLGAMLEKFPETFKPAVWWGQQKSKKSTSSSPRGFKSSMQYVNGEKVNGWSEGLEEDMKEIVGVIQSKDMEDYDRLGNKALVLNKT

Click here to download the sequence:
Link to NCBI Protein BLAST